Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 Y_RNA.157-201ENST00000363638 102 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 RN7SKP224-201ENST00000364140 325 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 RNU6-1151P-201ENST00000384684 107 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 PPIAP31-201ENST00000405422 495 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 RNU6-272P-201ENST00000411028 104 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 RNU6-373P-201ENST00000411247 98 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 JKAMPP1-201ENST00000413804 919 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 RGS17P1-201ENST00000423358 553 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 ISCA1P6-201ENST00000427740 390 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 RPL35AP21-201ENST00000437667 333 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 RPL23AP16-201ENST00000441715 421 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 CYCSP24-201ENST00000445119 316 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 TDGF1P1-201ENST00000445734 527 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 ISCUP1-201ENST00000454451 448 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 MTND1P12-201ENST00000455231 147 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 DHFRP3-201ENST00000455595 559 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 SNORA84-201ENST00000459229 133 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 RPL21P71-201ENST00000465598 459 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 AC017015.1-201ENST00000477387 286 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 AC139783.2-201ENST00000504847 1145 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 AC114967.1-201ENST00000504890 259 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 SNORA19.2-201ENST00000516013 114 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 HIF1AP1-201ENST00000553642 175 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 AC037471.2-201ENST00000564941 598 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 AC018638.8-201ENST00000588755 281 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 AL391646.1-201ENST00000603860 190 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 AC093788.1-201ENST00000609356 927 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 SNX18P1Y-201ENST00000616231 511 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 AC119744.1-201ENST00000454746 1715 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 AC140134.1-201ENST00000511830 3544 ntBASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNTNAP4Q9C0A0 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 GNG5P1-201ENST00000255500 204 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 RNU1-132P-201ENST00000364300 164 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 NPM1P38-201ENST00000403835 865 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 SEPT14P3-201ENST00000439401 183 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 MTCYBP6-201ENST00000441810 138 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AL732372.2-207ENST00000445840 183 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AC140076.1-201ENST00000449897 361 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 SEPT14P2-201ENST00000453405 183 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 RPL23AP71-201ENST00000470966 469 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 MTND1P3-201ENST00000484956 952 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AC006390.1-201ENST00000508068 283 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 SEPT14P4-201ENST00000513445 186 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 RNU6-150P-201ENST00000516237 95 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 Y_RNA.672-201ENST00000516289 104 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 FO082796.1-201ENST00000523795 183 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AL121821.2-201ENST00000556081 394 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AC107954.1-201ENST00000565906 727 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AC034268.2-201ENST00000571784 482 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 MIR5186-201ENST00000577504 120 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AC006130.2-201ENST00000586202 326 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AC007621.1-201ENST00000604544 437 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AC245389.1-201ENST00000605141 529 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 RNU6-87P-201ENST00000607561 108 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AL132765.2-201ENST00000610812 351 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 RNA5SP439-201ENST00000617595 124 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 AL645937.1-201ENST00000641739 1652 ntBASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.78□□□□□ -1.48
CNTNAP4Q9C0A0 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms