Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC140076.1-201ENST00000449897 361 ntBASIC3.14□□□□□ -1.91
TRIM4Q9C037 HMGN2P16-201ENST00000456802 261 ntBASIC3.14□□□□□ -1.91
TRIM4Q9C037 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM4Q9C037 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM4Q9C037 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM4Q9C037 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM4Q9C037 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM4Q9C037 AC008083.2-201ENST00000546707 476 ntBASIC3.14□□□□□ -1.91
TRIM4Q9C037 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM4Q9C037 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.14□□□□□ -1.91
TRIM4Q9C037 MTCO3P13-201ENST00000577757 781 ntBASIC3.14□□□□□ -1.91
TRIM4Q9C037 IGHV3-29-201ENST00000604817 344 ntBASIC3.14□□□□□ -1.91
TRIM4Q9C037 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM4Q9C037 IGHVIII-44-202ENST00000636235 289 ntBASIC3.14□□□□□ -1.91
TRIM4Q9C037 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM4Q9C037 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM4Q9C037 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
TRIM4Q9C037 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM4Q9C037 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM4Q9C037 RNU6-666P-201ENST00000363499 107 ntBASIC3.13□□□□□ -1.91
TRIM4Q9C037 MTND4P13-201ENST00000402078 1023 ntBASIC3.13□□□□□ -1.91
TRIM4Q9C037 HSPE1P1-201ENST00000421494 318 ntBASIC3.13□□□□□ -1.91
TRIM4Q9C037 RPL35AP12-201ENST00000425362 338 ntBASIC3.13□□□□□ -1.91
TRIM4Q9C037 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM4Q9C037 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM4Q9C037 AC107083.1-201ENST00000439643 279 ntBASIC3.13□□□□□ -1.91
TRIM4Q9C037 RPL37P6-202ENST00000464216 403 ntBASIC3.13□□□□□ -1.91
TRIM4Q9C037 PTGES3P3-201ENST00000511479 482 ntBASIC3.13□□□□□ -1.91
TRIM4Q9C037 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM4Q9C037 CKS1BP3-201ENST00000600888 237 ntBASIC3.13□□□□□ -1.91
TRIM4Q9C037 BDH2P1-201ENST00000602288 736 ntBASIC3.13□□□□□ -1.91
TRIM4Q9C037 AL390838.2-201ENST00000602394 274 ntBASIC3.13□□□□□ -1.91
TRIM4Q9C037 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.13□□□□□ -1.91
TRIM4Q9C037 AC055764.2-201ENST00000610089 670 ntBASIC3.13□□□□□ -1.91
TRIM4Q9C037 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM4Q9C037 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.13□□□□□ -1.91
TRIM4Q9C037 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM4Q9C037 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.13□□□□□ -1.91
TRIM4Q9C037 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM4Q9C037 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM4Q9C037 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM4Q9C037 OR5H2-201ENST00000355273 945 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TRIM4Q9C037 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM4Q9C037 RPL21P75-201ENST00000396599 483 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 RPL21P28-201ENST00000401418 483 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 AL592114.1-201ENST00000403842 483 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM4Q9C037 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM4Q9C037 ELOCP11-201ENST00000436690 332 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 ELOCP16-201ENST00000444494 332 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 AC005002.1-201ENST00000447458 540 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 SSXP4-201ENST00000451349 245 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM4Q9C037 RPL21P39-201ENST00000463605 483 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 RPL21P104-201ENST00000464143 478 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 AC011979.1-201ENST00000472300 483 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 ST13P14-201ENST00000474095 734 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM4Q9C037 RPL21P93-201ENST00000480465 489 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 AC233702.1-201ENST00000482905 502 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 AC087190.1-201ENST00000484462 480 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM4Q9C037 AC093591.1-201ENST00000491435 481 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 RPL21P16-201ENST00000495531 483 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 AC021678.1-201ENST00000505195 936 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM4Q9C037 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM4Q9C037 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM4Q9C037 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM4Q9C037 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM4Q9C037 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.12□□□□□ -1.91
TRIM4Q9C037 AC103881.1-201ENST00000603476 538 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 AC124312.4-201ENST00000605533 310 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 AC015802.5-201ENST00000607478 399 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 AC112503.1-201ENST00000608436 391 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM4Q9C037 AC004696.1-201ENST00000614345 607 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 AC121761.2-201ENST00000617300 689 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM4Q9C037 Z83843.1-201ENST00000604070 3685 ntBASIC3.12□□□□□ -1.91
TRIM4Q9C037 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TRIM4Q9C037 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM4Q9C037 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.11□□□□□ -1.91
TRIM4Q9C037 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM4Q9C037 MIR607-201ENST00000385241 96 ntBASIC3.11□□□□□ -1.91
TRIM4Q9C037 RNU1-101P-201ENST00000391171 127 ntBASIC3.11□□□□□ -1.91
TRIM4Q9C037 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM4Q9C037 AL356806.1-201ENST00000422524 916 ntBASIC3.11□□□□□ -1.91
TRIM4Q9C037 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.11□□□□□ -1.91
TRIM4Q9C037 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM4Q9C037 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM4Q9C037 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM4Q9C037 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM4Q9C037 HMGB3P6-201ENST00000444896 598 ntBASIC3.11□□□□□ -1.91
TRIM4Q9C037 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM4Q9C037 HMGB1P5-202ENST00000451497 985 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms