Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.44□□□□□ -1.86
SSX3Q99909 NUTF2P7-201ENST00000453086 375 ntBASIC3.44□□□□□ -1.86
SSX3Q99909 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.44□□□□□ -1.86
SSX3Q99909 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.44□□□□□ -1.86
SSX3Q99909 RN7SL691P-201ENST00000494487 301 ntBASIC3.44□□□□□ -1.86
SSX3Q99909 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.44□□□□□ -1.86
SSX3Q99909 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.44□□□□□ -1.86
SSX3Q99909 RNU1-61P-201ENST00000516107 151 ntBASIC3.44□□□□□ -1.86
SSX3Q99909 RPL12P22-201ENST00000519073 490 ntBASIC3.44□□□□□ -1.86
SSX3Q99909 AC093331.1-201ENST00000521474 169 ntBASIC3.44□□□□□ -1.86
SSX3Q99909 MTND2P32-201ENST00000521584 1038 ntBASIC3.44□□□□□ -1.86
SSX3Q99909 SLC2A13P1-201ENST00000531560 322 ntBASIC3.44□□□□□ -1.86
SSX3Q99909 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.44□□□□□ -1.86
SSX3Q99909 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.44□□□□□ -1.86
SSX3Q99909 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.44□□□□□ -1.86
SSX3Q99909 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.44□□□□□ -1.86
SSX3Q99909 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.44□□□□□ -1.86
SSX3Q99909 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.44□□□□□ -1.86
SSX3Q99909 FAM27D1-201ENST00000612308 341 ntBASIC3.44□□□□□ -1.86
SSX3Q99909 AC008121.2-201ENST00000614647 523 ntBASIC3.44□□□□□ -1.86
SSX3Q99909 AC069209.1-201ENST00000619282 651 ntBASIC3.44□□□□□ -1.86
SSX3Q99909 MIR8059-201ENST00000620427 81 ntBASIC3.44□□□□□ -1.86
SSX3Q99909 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.44□□□□□ -1.86
SSX3Q99909 MIR7702-201ENST00000621931 59 ntBASIC3.44□□□□□ -1.86
SSX3Q99909 AC095031.1-201ENST00000623685 672 ntBASIC3.44□□□□□ -1.86
SSX3Q99909 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SSX3Q99909 U6.101-201ENST00000637707 76 ntBASIC3.44□□□□□ -1.86
SSX3Q99909 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SSX3Q99909 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SSX3Q99909 MTCO1P23-201ENST00000415223 1526 ntBASIC3.44□□□□□ -1.86
SSX3Q99909 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.44□□□□□ -1.86
SSX3Q99909 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSX3Q99909 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SSX3Q99909 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSX3Q99909 ZNF826P-207ENST00000622273 1910 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.43□□□□□ -1.86
SSX3Q99909 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSX3Q99909 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SSX3Q99909 RNU6-1074P-201ENST00000383995 104 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 RNU6-1122P-201ENST00000384449 107 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 RNU6-1242P-201ENST00000391052 103 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 U3.29-201ENST00000391296 212 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 RPL21P109-201ENST00000422213 475 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.43□□□□□ -1.86
SSX3Q99909 RPL23AP46-201ENST00000438548 490 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 MTCYBP31-201ENST00000438855 1122 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.43□□□□□ -1.86
SSX3Q99909 PTENP1-201ENST00000447117 1215 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 RPL39P6-201ENST00000448289 150 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 RPS7P7-201ENST00000463499 571 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 FTH1P2-201ENST00000466086 412 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
SSX3Q99909 AC017015.1-201ENST00000477387 286 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 AC096751.1-202ENST00000502691 1067 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.43□□□□□ -1.86
SSX3Q99909 HMGB1P28-201ENST00000507778 552 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.43□□□□□ -1.86
SSX3Q99909 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.43□□□□□ -1.86
SSX3Q99909 RNU6-27P-201ENST00000516146 107 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.43□□□□□ -1.86
SSX3Q99909 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.43□□□□□ -1.86
SSX3Q99909 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.43□□□□□ -1.86
SSX3Q99909 AC025884.1-201ENST00000556034 378 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.43□□□□□ -1.86
SSX3Q99909 AL133457.1-201ENST00000564251 987 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.43□□□□□ -1.86
SSX3Q99909 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.43□□□□□ -1.86
SSX3Q99909 CCDC58P3-201ENST00000590792 430 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 BNIP3P24-201ENST00000593398 557 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 AL020997.2-201ENST00000602607 184 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 AP001330.4-201ENST00000604350 154 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 AC011816.2-201ENST00000607089 556 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 AL451074.6-201ENST00000608512 729 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 AL390240.1-201ENST00000612950 384 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 AC107075.1-201ENST00000613695 314 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 AC109809.1-201ENST00000619665 545 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 AC091046.2-201ENST00000620775 665 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 AL445363.3-201ENST00000623080 671 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.43□□□□□ -1.86
SSX3Q99909 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.43□□□□□ -1.86
SSX3Q99909 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SSX3Q99909 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSX3Q99909 ZNF542P-204ENST00000482727 1305 ntBASIC3.43□□□□□ -1.86
SSX3Q99909 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SSX3Q99909 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSX3Q99909 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SSX3Q99909 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.42□□□□□ -1.86
SSX3Q99909 AP002001.2-201ENST00000529025 1469 ntBASIC3.42□□□□□ -1.86
SSX3Q99909 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.42□□□□□ -1.86
SSX3Q99909 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.42□□□□□ -1.86
SSX3Q99909 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.42□□□□□ -1.86
SSX3Q99909 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
SSX3Q99909 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SSX3Q99909 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSX3Q99909 AL022722.2-201ENST00000402519 180 ntBASIC3.42□□□□□ -1.86
SSX3Q99909 AL591034.1-201ENST00000407447 340 ntBASIC3.42□□□□□ -1.86
SSX3Q99909 SNORA3C-201ENST00000408792 125 ntBASIC3.42□□□□□ -1.86
SSX3Q99909 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.42□□□□□ -1.86
SSX3Q99909 AC068533.2-201ENST00000411872 306 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms