Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC015967.1-201ENST00000619893 476 ntBASIC3.37□□□□□ -1.87
NPAS2Q99743 U6.98-201ENST00000637157 84 ntBASIC3.37□□□□□ -1.87
NPAS2Q99743 U6.105-201ENST00000637379 88 ntBASIC3.37□□□□□ -1.87
NPAS2Q99743 AC004972.1-201ENST00000623934 2209 ntBASIC3.37□□□□□ -1.87
NPAS2Q99743 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPAS2Q99743 AC004925.1-201ENST00000624256 2706 ntBASIC3.37□□□□□ -1.87
NPAS2Q99743 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPAS2Q99743 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
NPAS2Q99743 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NPAS2Q99743 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPAS2Q99743 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPAS2Q99743 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPAS2Q99743 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPAS2Q99743 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
NPAS2Q99743 RNVU1-3-201ENST00000364313 161 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 RNU6-730P-201ENST00000383954 104 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 MIR7-3-201ENST00000384898 110 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 RN7SKP53-201ENST00000411337 315 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 RNA5SP107-201ENST00000411358 122 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.36□□□□□ -1.87
NPAS2Q99743 AC007390.1-201ENST00000415722 356 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 AC017079.2-201ENST00000416102 485 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 DBIP2-201ENST00000419076 262 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 UBE2D3P3-201ENST00000426992 425 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 AP000907.1-201ENST00000428428 510 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 CYCSP4-201ENST00000429682 331 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.36□□□□□ -1.87
NPAS2Q99743 RPL21P23-201ENST00000446654 460 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 RPL7P59-201ENST00000447700 943 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.36□□□□□ -1.87
NPAS2Q99743 AC007967.1-201ENST00000455422 1159 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 HMGN1P18-201ENST00000457642 277 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 AC010285.1-201ENST00000470580 392 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 RN7SL594P-201ENST00000470590 287 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.36□□□□□ -1.87
NPAS2Q99743 AC021205.2-201ENST00000480069 347 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 MTCO2P9-201ENST00000503214 694 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 AC021146.5-201ENST00000503544 545 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 AC118282.2-201ENST00000508739 374 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.36□□□□□ -1.87
NPAS2Q99743 SNORA31.20-201ENST00000517111 133 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 DUXAP2-201ENST00000519198 589 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 AP003049.1-201ENST00000529418 457 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.36□□□□□ -1.87
NPAS2Q99743 AC007458.1-201ENST00000542812 373 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.36□□□□□ -1.87
NPAS2Q99743 AC011492.1-201ENST00000600023 315 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.36□□□□□ -1.87
NPAS2Q99743 AC010591.1-201ENST00000603941 649 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 AC012468.1-201ENST00000604888 430 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 U3.45-201ENST00000607547 219 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 XIST_intron.1-201ENST00000619444 68 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 AC092628.2-201ENST00000622492 339 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 AL356094.1-201ENST00000624663 1212 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 AL392088.2-201ENST00000637607 285 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 AC130650.2-201ENST00000618736 2403 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
NPAS2Q99743 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
NPAS2Q99743 AL672296.1-201ENST00000427780 2158 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPAS2Q99743 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
NPAS2Q99743 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.36□□□□□ -1.87
NPAS2Q99743 MTND4P34-201ENST00000572715 1371 ntBASIC3.36□□□□□ -1.87
NPAS2Q99743 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPAS2Q99743 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.36□□□□□ -1.87
NPAS2Q99743 AL365440.1-201ENST00000436135 2167 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.35□□□□□ -1.87
NPAS2Q99743 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
NPAS2Q99743 AC007496.3-201ENST00000624987 3443 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.35□□□□□ -1.87
NPAS2Q99743 MIR490-201ENST00000384865 128 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 SKINT1L-201ENST00000401057 817 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 RNU4-78P-201ENST00000410940 126 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.35□□□□□ -1.87
NPAS2Q99743 RAD23BP2-201ENST00000416003 1207 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 FNDC3CP-201ENST00000420795 1155 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 GTF2IP23-201ENST00000423746 351 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.35□□□□□ -1.87
NPAS2Q99743 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.35□□□□□ -1.87
NPAS2Q99743 MTATP6P11-201ENST00000428071 670 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 AL590103.1-201ENST00000434488 307 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
NPAS2Q99743 PRDX3P3-201ENST00000447765 522 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.35□□□□□ -1.87
NPAS2Q99743 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.35□□□□□ -1.87
NPAS2Q99743 TRBV26-201ENST00000456572 344 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 RNU7-140P-201ENST00000459546 60 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 RPL7P49-201ENST00000471402 708 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.35□□□□□ -1.87
NPAS2Q99743 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.35□□□□□ -1.87
NPAS2Q99743 AC008628.1-201ENST00000508663 265 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.35□□□□□ -1.87
NPAS2Q99743 MTCO2P32-201ENST00000514865 403 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.35□□□□□ -1.87
NPAS2Q99743 ARL2BPP5-201ENST00000523141 481 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 AP000790.1-201ENST00000528891 737 ntBASIC3.35□□□□□ -1.87
NPAS2Q99743 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NPAS2Q99743 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.35□□□□□ -1.87
NPAS2Q99743 AC004024.1-201ENST00000549244 247 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms