Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC084036.1-201ENST00000609190 508 ntBASIC3.04□□□□□ -1.92
CCDC42Q96M95 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC42Q96M95 FRG1DP-201ENST00000635586 771 ntBASIC3.04□□□□□ -1.92
CCDC42Q96M95 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CCDC42Q96M95 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC42Q96M95 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC42Q96M95 AC004925.1-201ENST00000624256 2706 ntBASIC3.03□□□□□ -1.92
CCDC42Q96M95 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC42Q96M95 MIR26A1-201ENST00000362205 77 ntBASIC3.03□□□□□ -1.92
CCDC42Q96M95 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC42Q96M95 RNU6-851P-201ENST00000384565 107 ntBASIC3.03□□□□□ -1.92
CCDC42Q96M95 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CCDC42Q96M95 RNU1-101P-201ENST00000391171 127 ntBASIC3.03□□□□□ -1.92
CCDC42Q96M95 OR51AB1P-201ENST00000429046 620 ntBASIC3.03□□□□□ -1.92
CCDC42Q96M95 ARL4AP4-201ENST00000434170 518 ntBASIC3.03□□□□□ -1.92
CCDC42Q96M95 AL513043.1-201ENST00000439124 535 ntBASIC3.03□□□□□ -1.92
CCDC42Q96M95 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC42Q96M95 CDC27P1-201ENST00000445384 715 ntBASIC3.03□□□□□ -1.92
CCDC42Q96M95 RPL5P24-201ENST00000463742 885 ntBASIC3.03□□□□□ -1.92
CCDC42Q96M95 RN7SL807P-201ENST00000470923 297 ntBASIC3.03□□□□□ -1.92
CCDC42Q96M95 RPS27AP9-201ENST00000477681 438 ntBASIC3.03□□□□□ -1.92
CCDC42Q96M95 SCGB1D5P-201ENST00000515134 247 ntBASIC3.03□□□□□ -1.92
CCDC42Q96M95 RNU6-56P-201ENST00000516986 93 ntBASIC3.03□□□□□ -1.92
CCDC42Q96M95 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC42Q96M95 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC42Q96M95 AL133271.1-201ENST00000538229 291 ntBASIC3.03□□□□□ -1.92
CCDC42Q96M95 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC42Q96M95 MTCO3P13-201ENST00000577757 781 ntBASIC3.03□□□□□ -1.92
CCDC42Q96M95 AC115989.2-201ENST00000578640 563 ntBASIC3.03□□□□□ -1.92
CCDC42Q96M95 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC42Q96M95 ZNF861P-201ENST00000588126 639 ntBASIC3.03□□□□□ -1.92
CCDC42Q96M95 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.03□□□□□ -1.92
CCDC42Q96M95 AC002076.2-201ENST00000617362 122 ntBASIC3.03□□□□□ -1.92
CCDC42Q96M95 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC42Q96M95 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC42Q96M95 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC42Q96M95 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
CCDC42Q96M95 AL355596.1-201ENST00000565399 3996 ntBASIC3.02□□□□□ -1.93
CCDC42Q96M95 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC42Q96M95 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CCDC42Q96M95 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC42Q96M95 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC42Q96M95 RNU6-452P-201ENST00000384406 107 ntBASIC3.02□□□□□ -1.93
CCDC42Q96M95 HSPE1P1-201ENST00000421494 318 ntBASIC3.02□□□□□ -1.93
CCDC42Q96M95 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC42Q96M95 SAR1AP4-201ENST00000429225 591 ntBASIC3.02□□□□□ -1.93
CCDC42Q96M95 AC022018.1-201ENST00000430685 241 ntBASIC3.02□□□□□ -1.93
CCDC42Q96M95 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.02□□□□□ -1.93
CCDC42Q96M95 RPL23AP20-201ENST00000447965 421 ntBASIC3.02□□□□□ -1.93
CCDC42Q96M95 NIPA2P5-201ENST00000452282 464 ntBASIC3.02□□□□□ -1.93
CCDC42Q96M95 KATNBL1P4-201ENST00000503545 918 ntBASIC3.02□□□□□ -1.93
CCDC42Q96M95 AC098799.2-201ENST00000509466 868 ntBASIC3.02□□□□□ -1.93
CCDC42Q96M95 HIGD1AP3-201ENST00000515857 278 ntBASIC3.02□□□□□ -1.93
CCDC42Q96M95 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.02□□□□□ -1.93
CCDC42Q96M95 ELOCP31-201ENST00000540463 467 ntBASIC3.02□□□□□ -1.93
CCDC42Q96M95 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC42Q96M95 AL049870.4-201ENST00000555741 486 ntBASIC3.02□□□□□ -1.93
CCDC42Q96M95 AL109653.1-201ENST00000603091 248 ntBASIC3.02□□□□□ -1.93
CCDC42Q96M95 AC124312.4-201ENST00000605533 310 ntBASIC3.02□□□□□ -1.93
CCDC42Q96M95 U6.48-201ENST00000618523 106 ntBASIC3.02□□□□□ -1.93
CCDC42Q96M95 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC42Q96M95 AC006111.3-201ENST00000622137 383 ntBASIC3.02□□□□□ -1.93
CCDC42Q96M95 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC42Q96M95 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.02□□□□□ -1.93
CCDC42Q96M95 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC42Q96M95 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC42Q96M95 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CCDC42Q96M95 RNA5SP72-201ENST00000364442 117 ntBASIC3.01□□□□□ -1.93
CCDC42Q96M95 RNU6-1293P-201ENST00000384077 107 ntBASIC3.01□□□□□ -1.93
CCDC42Q96M95 ATP5F1P3-201ENST00000397213 657 ntBASIC3.01□□□□□ -1.93
CCDC42Q96M95 MTND4P13-201ENST00000402078 1023 ntBASIC3.01□□□□□ -1.93
CCDC42Q96M95 TOMM22P1-201ENST00000418578 312 ntBASIC3.01□□□□□ -1.93
CCDC42Q96M95 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.01□□□□□ -1.93
CCDC42Q96M95 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC42Q96M95 RPS20P5-201ENST00000434808 360 ntBASIC3.01□□□□□ -1.93
CCDC42Q96M95 RPL34P26-201ENST00000445636 354 ntBASIC3.01□□□□□ -1.93
CCDC42Q96M95 AL627224.1-201ENST00000448334 444 ntBASIC3.01□□□□□ -1.93
CCDC42Q96M95 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC42Q96M95 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC42Q96M95 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC42Q96M95 AC021087.2-201ENST00000504656 1203 ntBASIC3.01□□□□□ -1.93
CCDC42Q96M95 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC42Q96M95 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC42Q96M95 AC004696.1-201ENST00000614345 607 ntBASIC3.01□□□□□ -1.93
CCDC42Q96M95 CYCSP41-201ENST00000616920 296 ntBASIC3.01□□□□□ -1.93
CCDC42Q96M95 RNU6-156P-201ENST00000621869 107 ntBASIC3.01□□□□□ -1.93
CCDC42Q96M95 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC42Q96M95 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CCDC42Q96M95 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC42Q96M95 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3□□□□□ -1.93
CCDC42Q96M95 AC096644.4-201ENST00000563417 2912 ntBASIC3□□□□□ -1.93
CCDC42Q96M95 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC42Q96M95 AP003122.5-201ENST00000527668 3766 ntBASIC3□□□□□ -1.93
CCDC42Q96M95 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC42Q96M95 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC42Q96M95 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CCDC42Q96M95 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3□□□□□ -1.93
CCDC42Q96M95 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3□□□□□ -1.93
CCDC42Q96M95 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3□□□□□ -1.93
CCDC42Q96M95 BTBD10P2-201ENST00000404779 676 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms