Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
CCDC7Q96M83 RN7SKP272-201ENST00000516988 232 ntBASIC4.07□□□□□ -1.76
CCDC7Q96M83 RNA5SP380-201ENST00000517190 98 ntBASIC4.07□□□□□ -1.76
CCDC7Q96M83 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC7Q96M83 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.07□□□□□ -1.76
CCDC7Q96M83 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC7Q96M83 MIR4319-201ENST00000577285 85 ntBASIC4.07□□□□□ -1.76
CCDC7Q96M83 AC115085.1-201ENST00000588924 229 ntBASIC4.07□□□□□ -1.76
CCDC7Q96M83 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC7Q96M83 KATNBL1P5-201ENST00000605015 517 ntBASIC4.07□□□□□ -1.76
CCDC7Q96M83 AC123768.4-201ENST00000616244 701 ntBASIC4.07□□□□□ -1.76
CCDC7Q96M83 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC4.07□□□□□ -1.76
CCDC7Q96M83 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC7Q96M83 FRG1DP-201ENST00000635586 771 ntBASIC4.07□□□□□ -1.76
CCDC7Q96M83 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC7Q96M83 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.06□□□□□ -1.76
CCDC7Q96M83 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC7Q96M83 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC7Q96M83 PNPT1P2-201ENST00000456768 2050 ntBASIC4.06□□□□□ -1.76
CCDC7Q96M83 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CCDC7Q96M83 RNA5SP184-201ENST00000411071 108 ntBASIC4.06□□□□□ -1.76
CCDC7Q96M83 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.06□□□□□ -1.76
CCDC7Q96M83 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC7Q96M83 TPTE2P6-202ENST00000445572 1007 ntBASIC4.06□□□□□ -1.76
CCDC7Q96M83 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC7Q96M83 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC7Q96M83 MRPL35P4-201ENST00000453682 566 ntBASIC4.06□□□□□ -1.76
CCDC7Q96M83 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CCDC7Q96M83 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC7Q96M83 MIR4716-201ENST00000579628 84 ntBASIC4.06□□□□□ -1.76
CCDC7Q96M83 ATP1B3P1-201ENST00000605365 821 ntBASIC4.06□□□□□ -1.76
CCDC7Q96M83 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC7Q96M83 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC7Q96M83 AC022509.4-201ENST00000621404 572 ntBASIC4.06□□□□□ -1.76
CCDC7Q96M83 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
CCDC7Q96M83 MTND4P31-201ENST00000425607 1343 ntBASIC4.06□□□□□ -1.76
CCDC7Q96M83 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC7Q96M83 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC7Q96M83 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC7Q96M83 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC7Q96M83 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC7Q96M83 AL136360.1-201ENST00000503377 1900 ntBASIC4.05□□□□□ -1.76
CCDC7Q96M83 RNU6-252P-201ENST00000363232 107 ntBASIC4.05□□□□□ -1.76
CCDC7Q96M83 SNORA9.2-201ENST00000365361 133 ntBASIC4.05□□□□□ -1.76
CCDC7Q96M83 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.05□□□□□ -1.76
CCDC7Q96M83 MIR181B1-201ENST00000385240 110 ntBASIC4.05□□□□□ -1.76
CCDC7Q96M83 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC7Q96M83 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC7Q96M83 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CCDC7Q96M83 RPS24P13-201ENST00000442520 397 ntBASIC4.05□□□□□ -1.76
CCDC7Q96M83 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC7Q96M83 RNU7-170P-201ENST00000459303 61 ntBASIC4.05□□□□□ -1.76
CCDC7Q96M83 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC7Q96M83 AC092045.1-201ENST00000495716 1231 ntBASIC4.05□□□□□ -1.76
CCDC7Q96M83 AC010468.3-201ENST00000508225 458 ntBASIC4.05□□□□□ -1.76
CCDC7Q96M83 RN7SKP132-201ENST00000516001 208 ntBASIC4.05□□□□□ -1.76
CCDC7Q96M83 AC103783.1-201ENST00000520506 373 ntBASIC4.05□□□□□ -1.76
CCDC7Q96M83 AC010306.1-201ENST00000523223 1117 ntBASIC4.05□□□□□ -1.76
CCDC7Q96M83 OR8K2P-201ENST00000524645 927 ntBASIC4.05□□□□□ -1.76
CCDC7Q96M83 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC7Q96M83 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC7Q96M83 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC7Q96M83 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC7Q96M83 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC7Q96M83 AP003117.1-201ENST00000602771 554 ntBASIC4.05□□□□□ -1.76
CCDC7Q96M83 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CCDC7Q96M83 AC079610.2-201ENST00000604818 690 ntBASIC4.05□□□□□ -1.76
CCDC7Q96M83 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC7Q96M83 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC7Q96M83 SAGE4P-201ENST00000442271 3381 ntBASIC4.05□□□□□ -1.76
CCDC7Q96M83 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC7Q96M83 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC7Q96M83 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC7Q96M83 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC7Q96M83 RNU6-98P-201ENST00000384173 107 ntBASIC4.04□□□□□ -1.76
CCDC7Q96M83 AC073508.1-201ENST00000428866 656 ntBASIC4.04□□□□□ -1.76
CCDC7Q96M83 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC7Q96M83 RPL7P29-201ENST00000437151 728 ntBASIC4.04□□□□□ -1.76
CCDC7Q96M83 RPL32P28-201ENST00000443577 397 ntBASIC4.04□□□□□ -1.76
CCDC7Q96M83 AC092685.1-201ENST00000447960 1243 ntBASIC4.04□□□□□ -1.76
CCDC7Q96M83 NPM1P13-201ENST00000452663 865 ntBASIC4.04□□□□□ -1.76
CCDC7Q96M83 IFNWP4-201ENST00000453148 294 ntBASIC4.04□□□□□ -1.76
CCDC7Q96M83 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC7Q96M83 AC010683.1-201ENST00000473673 378 ntBASIC4.04□□□□□ -1.76
CCDC7Q96M83 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC7Q96M83 AC068305.1-201ENST00000497406 726 ntBASIC4.04□□□□□ -1.76
CCDC7Q96M83 AL035404.1-201ENST00000497982 568 ntBASIC4.04□□□□□ -1.76
CCDC7Q96M83 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC7Q96M83 IGKV2-36-201ENST00000519999 223 ntBASIC4.04□□□□□ -1.76
CCDC7Q96M83 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC7Q96M83 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC7Q96M83 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC7Q96M83 CBX3P5-201ENST00000552017 521 ntBASIC4.04□□□□□ -1.76
CCDC7Q96M83 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC7Q96M83 MTND4LP24-201ENST00000572277 291 ntBASIC4.04□□□□□ -1.76
CCDC7Q96M83 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC7Q96M83 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC7Q96M83 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC7Q96M83 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC7Q96M83 AL118496.1-201ENST00000440201 1812 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms