Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC023050.1-201ENST00000498198 304 ntBASIC3.87□□□□□ -1.79
USP47Q96K76 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.87□□□□□ -1.79
USP47Q96K76 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.87□□□□□ -1.79
USP47Q96K76 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.87□□□□□ -1.79
USP47Q96K76 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.87□□□□□ -1.79
USP47Q96K76 RFPL1S-203ENST00000539579 330 ntBASIC3.87□□□□□ -1.79
USP47Q96K76 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.87□□□□□ -1.79
USP47Q96K76 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.87□□□□□ -1.79
USP47Q96K76 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.87□□□□□ -1.79
USP47Q96K76 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.87□□□□□ -1.79
USP47Q96K76 ZNF861P-201ENST00000588126 639 ntBASIC3.87□□□□□ -1.79
USP47Q96K76 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.87□□□□□ -1.79
USP47Q96K76 AC067852.4-201ENST00000590314 478 ntBASIC3.87□□□□□ -1.79
USP47Q96K76 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.87□□□□□ -1.79
USP47Q96K76 AC005046.1-201ENST00000608515 625 ntBASIC3.87□□□□□ -1.79
USP47Q96K76 AP004607.9-201ENST00000618202 316 ntBASIC3.87□□□□□ -1.79
USP47Q96K76 AC138393.1-206ENST00000540997 1886 ntBASIC3.87□□□□□ -1.79
USP47Q96K76 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP47Q96K76 ASNSP3-201ENST00000451989 1306 ntBASIC3.86□□□□□ -1.79
USP47Q96K76 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP47Q96K76 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.86□□□□□ -1.79
USP47Q96K76 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP47Q96K76 SNORA62.2-201ENST00000364672 152 ntBASIC3.86□□□□□ -1.79
USP47Q96K76 RNU6-452P-201ENST00000384406 107 ntBASIC3.86□□□□□ -1.79
USP47Q96K76 AL590004.2-201ENST00000404787 371 ntBASIC3.86□□□□□ -1.79
USP47Q96K76 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.86□□□□□ -1.79
USP47Q96K76 RWDD4P2-201ENST00000426392 563 ntBASIC3.86□□□□□ -1.79
USP47Q96K76 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.86□□□□□ -1.79
USP47Q96K76 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.86□□□□□ -1.79
USP47Q96K76 RPL34P26-201ENST00000445636 354 ntBASIC3.86□□□□□ -1.79
USP47Q96K76 EXTL2P1-201ENST00000446218 416 ntBASIC3.86□□□□□ -1.79
USP47Q96K76 AC126389.1-201ENST00000477436 290 ntBASIC3.86□□□□□ -1.79
USP47Q96K76 AC107398.1-201ENST00000486904 505 ntBASIC3.86□□□□□ -1.79
USP47Q96K76 RWDD4P1-201ENST00000488019 565 ntBASIC3.86□□□□□ -1.79
USP47Q96K76 AC090543.1-201ENST00000492168 485 ntBASIC3.86□□□□□ -1.79
USP47Q96K76 AC114781.4-201ENST00000513707 639 ntBASIC3.86□□□□□ -1.79
USP47Q96K76 AC034159.1-201ENST00000513885 583 ntBASIC3.86□□□□□ -1.79
USP47Q96K76 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.86□□□□□ -1.79
USP47Q96K76 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.86□□□□□ -1.79
USP47Q96K76 MIR7973-1-201ENST00000614683 76 ntBASIC3.86□□□□□ -1.79
USP47Q96K76 AC004825.2-201ENST00000616634 455 ntBASIC3.86□□□□□ -1.79
USP47Q96K76 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.86□□□□□ -1.79
USP47Q96K76 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP47Q96K76 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP47Q96K76 AC134882.1-201ENST00000603738 1676 ntBASIC3.85□□□□□ -1.79
USP47Q96K76 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.85□□□□□ -1.79
USP47Q96K76 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
USP47Q96K76 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP47Q96K76 RPL9P7-201ENST00000330965 580 ntBASIC3.85□□□□□ -1.79
USP47Q96K76 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP47Q96K76 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.85□□□□□ -1.79
USP47Q96K76 RPS24P8-201ENST00000431490 402 ntBASIC3.85□□□□□ -1.79
USP47Q96K76 NDUFS5P3-201ENST00000450668 321 ntBASIC3.85□□□□□ -1.79
USP47Q96K76 TPMTP4-201ENST00000450749 678 ntBASIC3.85□□□□□ -1.79
USP47Q96K76 RNU6-760P-201ENST00000516078 97 ntBASIC3.85□□□□□ -1.79
USP47Q96K76 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.85□□□□□ -1.79
USP47Q96K76 COX6B1P6-201ENST00000522347 255 ntBASIC3.85□□□□□ -1.79
USP47Q96K76 AP000857.1-201ENST00000532151 543 ntBASIC3.85□□□□□ -1.79
USP47Q96K76 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.85□□□□□ -1.79
USP47Q96K76 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.85□□□□□ -1.79
USP47Q96K76 VN1R84P-201ENST00000593697 235 ntBASIC3.85□□□□□ -1.79
USP47Q96K76 AC231759.1-201ENST00000616455 597 ntBASIC3.85□□□□□ -1.79
USP47Q96K76 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.85□□□□□ -1.79
USP47Q96K76 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP47Q96K76 AL118496.1-201ENST00000440201 1812 ntBASIC3.84□□□□□ -1.79
USP47Q96K76 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.84□□□□□ -1.79
USP47Q96K76 RPL30P3-201ENST00000424262 333 ntBASIC3.84□□□□□ -1.79
USP47Q96K76 AC244505.4-201ENST00000434905 287 ntBASIC3.84□□□□□ -1.79
USP47Q96K76 SSXP5-201ENST00000443473 287 ntBASIC3.84□□□□□ -1.79
USP47Q96K76 MTND2P8-201ENST00000450555 1025 ntBASIC3.84□□□□□ -1.79
USP47Q96K76 AC078817.1-201ENST00000492623 435 ntBASIC3.84□□□□□ -1.79
USP47Q96K76 AC022784.5-201ENST00000522241 437 ntBASIC3.84□□□□□ -1.79
USP47Q96K76 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.84□□□□□ -1.79
USP47Q96K76 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP47Q96K76 AC091544.4-201ENST00000555268 342 ntBASIC3.84□□□□□ -1.79
USP47Q96K76 MIR3605-201ENST00000583214 100 ntBASIC3.84□□□□□ -1.79
USP47Q96K76 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.84□□□□□ -1.79
USP47Q96K76 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.84□□□□□ -1.79
USP47Q96K76 AC112503.1-201ENST00000608436 391 ntBASIC3.84□□□□□ -1.79
USP47Q96K76 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.84□□□□□ -1.79
USP47Q96K76 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
USP47Q96K76 AC092435.3-201ENST00000565538 3654 ntBASIC3.84□□□□□ -1.8
USP47Q96K76 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
USP47Q96K76 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
USP47Q96K76 RNF6P1-201ENST00000444889 1784 ntBASIC3.83□□□□□ -1.8
USP47Q96K76 SNORA27.3-201ENST00000364937 134 ntBASIC3.83□□□□□ -1.8
USP47Q96K76 MIR9-1-201ENST00000385198 89 ntBASIC3.83□□□□□ -1.8
USP47Q96K76 AL356057.3-201ENST00000402607 340 ntBASIC3.83□□□□□ -1.8
USP47Q96K76 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.83□□□□□ -1.8
USP47Q96K76 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.83□□□□□ -1.8
USP47Q96K76 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.83□□□□□ -1.8
USP47Q96K76 RPS20P5-201ENST00000434808 360 ntBASIC3.83□□□□□ -1.8
USP47Q96K76 MED6P1-201ENST00000439659 713 ntBASIC3.83□□□□□ -1.8
USP47Q96K76 EEF1B2P7-201ENST00000451177 676 ntBASIC3.83□□□□□ -1.8
USP47Q96K76 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.83□□□□□ -1.8
USP47Q96K76 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.83□□□□□ -1.8
USP47Q96K76 SNORA9.3-201ENST00000516383 129 ntBASIC3.83□□□□□ -1.8
USP47Q96K76 HMGB1P46-201ENST00000520062 610 ntBASIC3.83□□□□□ -1.8
USP47Q96K76 AL133271.1-201ENST00000538229 291 ntBASIC3.83□□□□□ -1.8
USP47Q96K76 OR4U1P-201ENST00000554958 912 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms