Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC5.3□□□□□ -1.56
SHDQ96IW2 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.3□□□□□ -1.56
SHDQ96IW2 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.3□□□□□ -1.56
SHDQ96IW2 RPS20P5-201ENST00000434808 360 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.3□□□□□ -1.56
SHDQ96IW2 AC093019.1-201ENST00000443135 252 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 RPS17P13-201ENST00000448974 407 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.3□□□□□ -1.56
SHDQ96IW2 AL356010.1-201ENST00000456364 102 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 PMCHL2-203ENST00000457791 237 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 RPS20P20-201ENST00000460498 340 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
SHDQ96IW2 RPS17P5-201ENST00000498293 408 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 HMGN1P12-201ENST00000499125 195 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 MTND3P22-201ENST00000510932 243 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.3□□□□□ -1.56
SHDQ96IW2 RNU2-10P-201ENST00000516375 211 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 RNU6-835P-201ENST00000516974 104 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.3□□□□□ -1.56
SHDQ96IW2 PARP1P2-201ENST00000556806 195 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.3□□□□□ -1.56
SHDQ96IW2 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.3□□□□□ -1.56
SHDQ96IW2 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.3□□□□□ -1.56
SHDQ96IW2 GLUD1P4-201ENST00000590914 418 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 AC068790.4-201ENST00000602474 263 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 AL031176.1-201ENST00000604554 466 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 AC115621.1-201ENST00000604653 858 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 U73479.1-201ENST00000618062 168 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 AC006504.8-201ENST00000621046 635 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 AC093648.1-201ENST00000623546 606 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 AC024614.3-201ENST00000637860 256 ntBASIC5.3□□□□□ -1.56
SHDQ96IW2 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.3□□□□□ -1.56
SHDQ96IW2 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHDQ96IW2 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHDQ96IW2 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHDQ96IW2 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHDQ96IW2 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHDQ96IW2 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
SHDQ96IW2 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHDQ96IW2 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHDQ96IW2 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHDQ96IW2 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHDQ96IW2 FAM91A3P-201ENST00000456826 2544 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHDQ96IW2 A2MP1-204ENST00000566278 4130 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHDQ96IW2 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHDQ96IW2 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHDQ96IW2 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SHDQ96IW2 Y_RNA.61-201ENST00000362835 102 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 Y_RNA.157-201ENST00000363638 102 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 RNA5SP505-201ENST00000364748 108 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 Y_RNA.279-201ENST00000364763 95 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 AC019155.1-201ENST00000382242 574 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 SNORA66-201ENST00000384792 133 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 RNU6-516P-201ENST00000411381 104 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.29□□□□□ -1.56
SHDQ96IW2 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.29□□□□□ -1.56
SHDQ96IW2 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.29□□□□□ -1.56
SHDQ96IW2 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.29□□□□□ -1.56
SHDQ96IW2 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.29□□□□□ -1.56
SHDQ96IW2 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.29□□□□□ -1.56
SHDQ96IW2 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 RPL21P89-201ENST00000444021 467 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 AL591623.2-201ENST00000449978 222 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 RPS23P7-201ENST00000466210 444 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHDQ96IW2 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.29□□□□□ -1.56
SHDQ96IW2 AC017037.2-201ENST00000513850 890 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 SNORD60.2-201ENST00000516883 86 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 OR8L1P-201ENST00000534005 955 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.29□□□□□ -1.56
SHDQ96IW2 AC068446.3-201ENST00000555285 382 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.29□□□□□ -1.56
SHDQ96IW2 AC074050.1-201ENST00000563247 211 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHDQ96IW2 AC209154.1-201ENST00000582156 337 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 AP000769.2-201ENST00000602344 396 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 AC112230.1-201ENST00000604342 547 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 AL627230.1-201ENST00000613077 211 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 AL591926.8-201ENST00000616876 211 ntBASIC5.29□□□□□ -1.56
SHDQ96IW2 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SHDQ96IW2 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SHDQ96IW2 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHDQ96IW2 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHDQ96IW2 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHDQ96IW2 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.29□□□□□ -1.56
SHDQ96IW2 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.29□□□□□ -1.56
SHDQ96IW2 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHDQ96IW2 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.29□□□□□ -1.56
SHDQ96IW2 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHDQ96IW2 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
SHDQ96IW2 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SHDQ96IW2 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHDQ96IW2 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SHDQ96IW2 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.29□□□□□ -1.56
SHDQ96IW2 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHDQ96IW2 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHDQ96IW2 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 218.1 ms