Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PTP4A1Q93096 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.59□□□□□ -1.83
PTP4A1Q93096 AC109315.1-201ENST00000584143 1347 ntBASIC3.59□□□□□ -1.83
PTP4A1Q93096 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.59□□□□□ -1.83
PTP4A1Q93096 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
PTP4A1Q93096 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
PTP4A1Q93096 ZNF807-201ENST00000328088 1707 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
PTP4A1Q93096 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PTP4A1Q93096 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
PTP4A1Q93096 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
PTP4A1Q93096 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTP4A1Q93096 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PTP4A1Q93096 NACA3P-201ENST00000359690 648 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PTP4A1Q93096 RNU6-413P-201ENST00000384115 107 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 AL136372.1-201ENST00000403060 228 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 AC109780.2-201ENST00000413467 845 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 AC108032.1-201ENST00000416706 207 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 AC127526.1-201ENST00000417526 366 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.58□□□□□ -1.84
PTP4A1Q93096 RPL27AP8-201ENST00000424277 446 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 NIPA2P1-201ENST00000426223 976 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.58□□□□□ -1.84
PTP4A1Q93096 AL590233.1-201ENST00000430017 456 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 ARF4P2-201ENST00000430209 526 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 AC007327.1-201ENST00000447461 264 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.58□□□□□ -1.84
PTP4A1Q93096 FCF1P6-201ENST00000456841 595 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.58□□□□□ -1.84
PTP4A1Q93096 RPS23P7-201ENST00000466210 444 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 RPL23AP14-201ENST00000468281 468 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 RN7SL330P-201ENST00000469709 307 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
PTP4A1Q93096 FAM172BP-201ENST00000487497 1089 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 VN1R104P-201ENST00000505115 1009 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.58□□□□□ -1.84
PTP4A1Q93096 RN7SKP31-201ENST00000516354 278 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.58□□□□□ -1.84
PTP4A1Q93096 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.58□□□□□ -1.84
PTP4A1Q93096 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.58□□□□□ -1.84
PTP4A1Q93096 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PTP4A1Q93096 AL132657.2-201ENST00000564417 358 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.58□□□□□ -1.84
PTP4A1Q93096 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.58□□□□□ -1.84
PTP4A1Q93096 AC006116.5-201ENST00000591936 559 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.58□□□□□ -1.84
PTP4A1Q93096 BNIP3P26-201ENST00000600827 554 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 DUXAP11-201ENST00000603858 526 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 AL022099.1-201ENST00000604551 712 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 AL592436.1-201ENST00000605135 558 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 AL365503.1-201ENST00000605247 905 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 ARF4P1-201ENST00000605447 541 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 AL445423.1-201ENST00000609941 536 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 MLECP1-201ENST00000615893 709 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 AC006338.2-201ENST00000616864 791 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 AL445567.2-201ENST00000618935 498 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 AC084824.4-201ENST00000620106 731 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 AL353748.2-201ENST00000622148 471 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 LINC02211-204ENST00000642024 1070 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PTP4A1Q93096 LARP1BP1-201ENST00000506036 1359 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PTP4A1Q93096 AP002907.1-201ENST00000606361 1430 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PTP4A1Q93096 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.58□□□□□ -1.84
PTP4A1Q93096 AL079343.1-201ENST00000572358 1771 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.58□□□□□ -1.84
PTP4A1Q93096 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTP4A1Q93096 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
PTP4A1Q93096 CUL1P1-201ENST00000509510 2425 ntBASIC3.58□□□□□ -1.84
PTP4A1Q93096 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.57□□□□□ -1.84
PTP4A1Q93096 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTP4A1Q93096 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTP4A1Q93096 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.57□□□□□ -1.84
PTP4A1Q93096 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTP4A1Q93096 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PTP4A1Q93096 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PTP4A1Q93096 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
PTP4A1Q93096 SNORA60-201ENST00000362396 134 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 RNA5SP443-201ENST00000363083 132 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.57□□□□□ -1.84
PTP4A1Q93096 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 MIR141-201ENST00000384975 95 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 HMGN2P8-201ENST00000391458 268 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.57□□□□□ -1.84
PTP4A1Q93096 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.57□□□□□ -1.84
PTP4A1Q93096 AL050321.1-201ENST00000432363 400 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 AC083863.1-201ENST00000438811 231 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 HMGB1P37-201ENST00000439613 609 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 RPS4XP4-201ENST00000443195 763 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 AC005539.1-201ENST00000443768 1479 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 AC009220.1-201ENST00000451614 275 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 AC010618.1-201ENST00000469924 477 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PTP4A1Q93096 RNU6-583P-201ENST00000516012 92 ntBASIC3.57□□□□□ -1.84
PTP4A1Q93096 SNORA31.9-201ENST00000516429 84 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms