Protein–RNA interactions for Protein: Q92575

UBXN4, UBX domain-containing protein 4, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4Q92575 RNA5SP146-201ENST00000410743 123 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.34□□□□□ -1.55
UBXN4Q92575 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.34□□□□□ -1.55
UBXN4Q92575 AC137499.1-201ENST00000427602 88 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 AC079780.1-201ENST00000428259 207 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.34□□□□□ -1.55
UBXN4Q92575 AC093156.1-201ENST00000440382 670 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 AL359073.1-201ENST00000448036 403 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 RPS24P6-201ENST00000452670 400 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 MTCO3P20-201ENST00000454926 688 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.34□□□□□ -1.55
UBXN4Q92575 MTND1P12-201ENST00000455231 147 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.34□□□□□ -1.55
UBXN4Q92575 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.34□□□□□ -1.55
UBXN4Q92575 RPS3AP17-201ENST00000472594 777 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 COPS8P2-201ENST00000473228 627 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 AC020893.1-201ENST00000502452 580 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 AC083829.1-201ENST00000503756 657 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.34□□□□□ -1.55
UBXN4Q92575 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.34□□□□□ -1.55
UBXN4Q92575 VN1R104P-201ENST00000505115 1009 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 AC008638.1-201ENST00000506035 866 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 RN7SKP276-201ENST00000516242 268 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 Vault.3-201ENST00000516676 95 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 RNA5SP34-201ENST00000516887 130 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 MTCO2P4-201ENST00000517968 247 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 AC105233.3-201ENST00000531125 744 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.34□□□□□ -1.55
UBXN4Q92575 RPL21P7-201ENST00000557463 483 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.34□□□□□ -1.55
UBXN4Q92575 BNIP3P5-201ENST00000562290 498 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 AL121834.1-201ENST00000572284 509 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 FAM60BP-201ENST00000578364 658 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.34□□□□□ -1.55
UBXN4Q92575 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
UBXN4Q92575 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.34□□□□□ -1.55
UBXN4Q92575 OR7E18P-201ENST00000592589 702 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 AC087283.1-201ENST00000604029 1074 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 AC245517.5-201ENST00000611529 162 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 AC093838.1-201ENST00000613014 469 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 uc_338.12-201ENST00000616344 181 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 AL353748.2-201ENST00000622148 471 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 AL732618.1-201ENST00000623251 301 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 AC243312.2-201ENST00000623340 601 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.34□□□□□ -1.55
UBXN4Q92575 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
UBXN4Q92575 MIR4275-201ENST00000636486 87 ntBASIC5.34□□□□□ -1.55
UBXN4Q92575 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UBXN4Q92575 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.34□□□□□ -1.55
UBXN4Q92575 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
UBXN4Q92575 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
UBXN4Q92575 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
UBXN4Q92575 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
UBXN4Q92575 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
UBXN4Q92575 PNPT1P2-201ENST00000456768 2050 ntBASIC5.33□□□□□ -1.56
UBXN4Q92575 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UBXN4Q92575 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.33□□□□□ -1.56
UBXN4Q92575 AC005832.2-201ENST00000538921 1430 ntBASIC5.33□□□□□ -1.56
UBXN4Q92575 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
UBXN4Q92575 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.33□□□□□ -1.56
UBXN4Q92575 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.33□□□□□ -1.56
UBXN4Q92575 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.33□□□□□ -1.56
UBXN4Q92575 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
UBXN4Q92575 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
UBXN4Q92575 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
UBXN4Q92575 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UBXN4Q92575 RN7SKP104-201ENST00000362605 328 ntBASIC5.33□□□□□ -1.56
UBXN4Q92575 RNY1P12-201ENST00000364251 105 ntBASIC5.33□□□□□ -1.56
UBXN4Q92575 SNORA51.2-201ENST00000364595 132 ntBASIC5.33□□□□□ -1.56
UBXN4Q92575 RNY3P13-201ENST00000365542 102 ntBASIC5.33□□□□□ -1.56
UBXN4Q92575 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
UBXN4Q92575 RNU6-259P-201ENST00000383999 107 ntBASIC5.33□□□□□ -1.56
UBXN4Q92575 Y_RNA.505-201ENST00000384489 102 ntBASIC5.33□□□□□ -1.56
UBXN4Q92575 MIR195-201ENST00000385194 87 ntBASIC5.33□□□□□ -1.56
UBXN4Q92575 MIR607-201ENST00000385241 96 ntBASIC5.33□□□□□ -1.56
UBXN4Q92575 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
UBXN4Q92575 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.33□□□□□ -1.56
UBXN4Q92575 RN7SKP114-201ENST00000410327 279 ntBASIC5.33□□□□□ -1.56
UBXN4Q92575 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.33□□□□□ -1.56
UBXN4Q92575 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.33□□□□□ -1.56
UBXN4Q92575 USP9YP36-201ENST00000424581 829 ntBASIC5.33□□□□□ -1.56
UBXN4Q92575 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.33□□□□□ -1.56
UBXN4Q92575 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.33□□□□□ -1.56
UBXN4Q92575 ELOCP30-201ENST00000447108 299 ntBASIC5.33□□□□□ -1.56
UBXN4Q92575 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.33□□□□□ -1.56
UBXN4Q92575 snoU13.4-201ENST00000458916 104 ntBASIC5.33□□□□□ -1.56
UBXN4Q92575 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.33□□□□□ -1.56
UBXN4Q92575 HMGB1P22-201ENST00000505315 124 ntBASIC5.33□□□□□ -1.56
UBXN4Q92575 AC005921.1-201ENST00000510589 286 ntBASIC5.33□□□□□ -1.56
UBXN4Q92575 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.33□□□□□ -1.56
UBXN4Q92575 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.33□□□□□ -1.56
UBXN4Q92575 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.33□□□□□ -1.56
UBXN4Q92575 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.33□□□□□ -1.56
UBXN4Q92575 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.33□□□□□ -1.56
UBXN4Q92575 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.33□□□□□ -1.56
UBXN4Q92575 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.33□□□□□ -1.56
UBXN4Q92575 AL391840.1-201ENST00000571144 367 ntBASIC5.33□□□□□ -1.56
UBXN4Q92575 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.33□□□□□ -1.56
UBXN4Q92575 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UBXN4Q92575 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms