Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RNU6-670P-201ENST00000364312 104 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 RNA5SP21-201ENST00000410917 96 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 RNA5SP508-201ENST00000411327 119 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AL357520.1-201ENST00000441557 453 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AC104629.2-201ENST00000468627 598 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 HMGB1P47-201ENST00000511281 589 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AC034244.2-201ENST00000514668 858 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AC117525.1-201ENST00000515228 503 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 RNA5SP24-201ENST00000516478 95 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AC021755.1-201ENST00000559747 1447 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AL158827.2-201ENST00000602494 330 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AL035413.2-201ENST00000604801 525 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 MIR7111-201ENST00000619751 72 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AL691447.3-201ENST00000635020 330 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 RNU6-618P-201ENST00000363518 112 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AC007563.3-201ENST00000433233 371 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 VDAC1P3-201ENST00000434069 851 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 SNORD109B-201ENST00000458961 67 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 SNORD109A-201ENST00000459128 67 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 METTL15P1-201ENST00000481421 1045 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AC019227.1-201ENST00000526902 510 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AP000873.5-201ENST00000533906 236 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AL355836.1-201ENST00000555951 870 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 CYCSP39-201ENST00000565821 309 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 KATNBL1P1-201ENST00000605192 748 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AC009032.1-201ENST00000617574 431 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 AC243829.7-201ENST00000633081 225 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 MIR6733-201ENST00000635723 61 ntBASIC2.85□□□□□ -1.95
SHROOM3Q8TF72 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 MIR26A1-201ENST00000362205 77 ntBASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 YPEL5P1-201ENST00000419731 367 ntBASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 MTND4LP14-201ENST00000429447 288 ntBASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 MTND2P3-201ENST00000452458 470 ntBASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 RPL9P33-201ENST00000484311 566 ntBASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 USP9YP5-201ENST00000511770 630 ntBASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 RN7SKP244-201ENST00000516513 307 ntBASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 SEC11B-201ENST00000518383 499 ntBASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 AC087272.1-201ENST00000523624 533 ntBASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 AC012414.2-201ENST00000559474 187 ntBASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 AC006213.5-201ENST00000619673 288 ntBASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 AC066616.2-201ENST00000559334 1481 ntBASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 AC107021.2-201ENST00000567714 2095 ntBASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
SHROOM3Q8TF72 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.84□□□□□ -1.96
SHROOM3Q8TF72 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 PTP4A1P5-201ENST00000420305 455 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 BX276092.3-201ENST00000424182 230 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 CACYBPP1-201ENST00000438592 684 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 GAPDHP27-201ENST00000447427 1020 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 VN1R48P-201ENST00000448149 1036 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 FABP5P6-201ENST00000510588 409 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 ACTR6P1-201ENST00000514311 1104 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 SNORD53-201ENST00000579969 78 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 CR381653.2-201ENST00000624041 768 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 HPVC1-201ENST00000629899 1198 ntBASIC2.83□□□□□ -1.96
SHROOM3Q8TF72 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms