Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.75□□□□□ -1.81
RTL3Q8N8U3 AC000367.1-201ENST00000452711 1766 ntBASIC3.75□□□□□ -1.81
RTL3Q8N8U3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
RTL3Q8N8U3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
RTL3Q8N8U3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RTL3Q8N8U3 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RTL3Q8N8U3 AL365440.1-201ENST00000436135 2167 ntBASIC3.75□□□□□ -1.81
RTL3Q8N8U3 AC116096.1-201ENST00000566804 2314 ntBASIC3.75□□□□□ -1.81
RTL3Q8N8U3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 RNU6-492P-201ENST00000363035 104 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 MIR217-201ENST00000384817 110 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 BOLA3P4-201ENST00000418151 400 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AL035423.1-201ENST00000420331 213 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AC093698.1-201ENST00000423843 571 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 RPL31P54-201ENST00000429803 370 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AC018644.1-201ENST00000429934 551 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 RPS3AP46-201ENST00000448352 682 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AL133547.1-201ENST00000448546 220 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 HMGB1P15-201ENST00000453854 435 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 MTCO3P20-201ENST00000454926 688 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 DUXAP8-207ENST00000456786 622 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 PLGLA-201ENST00000465668 449 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 PABPC1P3-201ENST00000469174 459 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AC078785.3-201ENST00000476607 425 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AC108078.3-201ENST00000502633 489 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AC004062.1-201ENST00000509926 645 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AC008127.2-201ENST00000549925 1075 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 RPP40P2-201ENST00000603596 712 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AC092954.1-201ENST00000609121 445 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 DUXAP10-204ENST00000612052 616 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AL161637.1-201ENST00000622380 412 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AL732618.1-201ENST00000623251 301 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AC087821.2-201ENST00000637086 450 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 AC119674.1-207ENST00000641355 633 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 ZNF663P-202ENST00000641770 1131 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 ZNF285B-201ENST00000561698 1767 ntBASIC3.74□□□□□ -1.81
RTL3Q8N8U3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RTL3Q8N8U3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 AP001148.1-201ENST00000624124 2359 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 RNA5SP129-201ENST00000410276 118 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 RAB9AP3-201ENST00000412737 573 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 AC092634.6-201ENST00000418558 192 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 USP9YP21-201ENST00000420603 432 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 Z93242.1-201ENST00000427102 353 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 RAB9AP1-201ENST00000449393 573 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 OFD1P3Y-201ENST00000453312 783 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 FTH1P2-201ENST00000466086 412 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 HMGB3P15-201ENST00000507326 574 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 RNU1-95P-201ENST00000516357 160 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 RNU1-128P-201ENST00000516704 160 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 AC023632.4-201ENST00000517783 191 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 IGKV2D-23-201ENST00000518179 286 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 NARSP2-201ENST00000518524 679 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 IGKV2D-19-201ENST00000523346 262 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 SYF2P1-201ENST00000550658 413 ntBASIC3.73□□□□□ -1.81
RTL3Q8N8U3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.73□□□□□ -1.81
RTL3Q8N8U3 GTF2IP22-201ENST00000554443 182 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms