Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC243773.3-201ENST00000613270 256 ntBASIC4.04□□□□□ -1.76
PRPF39Q86UA1 AC109809.1-201ENST00000619665 545 ntBASIC4.04□□□□□ -1.76
PRPF39Q86UA1 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 AC244517.1-201ENST00000606030 2086 ntBASIC4.04□□□□□ -1.76
PRPF39Q86UA1 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PRPF39Q86UA1 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.03□□□□□ -1.76
PRPF39Q86UA1 SNORA72.3-201ENST00000365074 132 ntBASIC4.03□□□□□ -1.76
PRPF39Q86UA1 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 Y_RNA.408-201ENST00000383987 102 ntBASIC4.03□□□□□ -1.76
PRPF39Q86UA1 ATP5F1P3-201ENST00000397213 657 ntBASIC4.03□□□□□ -1.76
PRPF39Q86UA1 MIR1251-201ENST00000408552 70 ntBASIC4.03□□□□□ -1.76
PRPF39Q86UA1 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 PSMA6P3-201ENST00000428242 164 ntBASIC4.03□□□□□ -1.76
PRPF39Q86UA1 VDAC1P3-201ENST00000434069 851 ntBASIC4.03□□□□□ -1.76
PRPF39Q86UA1 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 AC083863.1-201ENST00000438811 231 ntBASIC4.03□□□□□ -1.76
PRPF39Q86UA1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 PTENP1-201ENST00000447117 1215 ntBASIC4.03□□□□□ -1.76
PRPF39Q86UA1 AC004062.1-201ENST00000509926 645 ntBASIC4.03□□□□□ -1.76
PRPF39Q86UA1 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 RN7SKP244-201ENST00000516513 307 ntBASIC4.03□□□□□ -1.76
PRPF39Q86UA1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 AC024224.1-201ENST00000538284 609 ntBASIC4.03□□□□□ -1.76
PRPF39Q86UA1 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 YPEL5P3-201ENST00000547227 352 ntBASIC4.03□□□□□ -1.76
PRPF39Q86UA1 AC141257.3-201ENST00000572906 215 ntBASIC4.03□□□□□ -1.76
PRPF39Q86UA1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 AL451074.6-201ENST00000608512 729 ntBASIC4.03□□□□□ -1.76
PRPF39Q86UA1 AL354798.1-201ENST00000622505 329 ntBASIC4.03□□□□□ -1.76
PRPF39Q86UA1 AC091925.2-201ENST00000625059 256 ntBASIC4.03□□□□□ -1.76
PRPF39Q86UA1 AC090897.3-201ENST00000636973 1157 ntBASIC4.03□□□□□ -1.76
PRPF39Q86UA1 UBE3AP2-201ENST00000429033 2259 ntBASIC4.03□□□□□ -1.76
PRPF39Q86UA1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRPF39Q86UA1 AL365440.1-201ENST00000436135 2167 ntBASIC4.03□□□□□ -1.76
PRPF39Q86UA1 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
PRPF39Q86UA1 GABPAP-201ENST00000419271 1356 ntBASIC4.02□□□□□ -1.77
PRPF39Q86UA1 NCAPGP1-201ENST00000505112 1814 ntBASIC4.02□□□□□ -1.77
PRPF39Q86UA1 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 MIR200C-201ENST00000384980 68 ntBASIC4.02□□□□□ -1.77
PRPF39Q86UA1 AL590704.1-201ENST00000402856 794 ntBASIC4.02□□□□□ -1.77
PRPF39Q86UA1 RNU6-712P-201ENST00000410558 100 ntBASIC4.02□□□□□ -1.77
PRPF39Q86UA1 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 ATP5HP2-201ENST00000433885 485 ntBASIC4.02□□□□□ -1.77
PRPF39Q86UA1 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 MTND2P20-201ENST00000440805 661 ntBASIC4.02□□□□□ -1.77
PRPF39Q86UA1 BTF3P5-201ENST00000457252 467 ntBASIC4.02□□□□□ -1.77
PRPF39Q86UA1 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 RPS3AP6-201ENST00000484430 795 ntBASIC4.02□□□□□ -1.77
PRPF39Q86UA1 AL139099.1-201ENST00000497398 403 ntBASIC4.02□□□□□ -1.77
PRPF39Q86UA1 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 BTF3L4P4-201ENST00000506381 449 ntBASIC4.02□□□□□ -1.77
PRPF39Q86UA1 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 AC109445.1-201ENST00000512356 383 ntBASIC4.02□□□□□ -1.77
PRPF39Q86UA1 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 AC004987.4-201ENST00000603383 338 ntBASIC4.02□□□□□ -1.77
PRPF39Q86UA1 AC027449.1-201ENST00000608890 407 ntBASIC4.02□□□□□ -1.77
PRPF39Q86UA1 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 IPO8P1-201ENST00000455509 3109 ntBASIC4.02□□□□□ -1.77
PRPF39Q86UA1 AP002907.1-201ENST00000606361 1430 ntBASIC4.02□□□□□ -1.77
PRPF39Q86UA1 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.02□□□□□ -1.77
PRPF39Q86UA1 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PRPF39Q86UA1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms