Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC004801.2-202ENST00000463559 283 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.75□□□□□ -2.13
CSMD3Q7Z407 IGLVIV-53-201ENST00000520107 367 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 HPRT1P3-201ENST00000539521 576 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 ZNF861P-201ENST00000588126 639 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AL670379.6-201ENST00000603753 252 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AL670379.11-201ENST00000604059 253 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AL670379.10-201ENST00000604330 253 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AC008162.1-201ENST00000604718 254 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AL670379.1-201ENST00000604752 252 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AL670379.2-201ENST00000604983 252 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AL670379.5-201ENST00000605253 252 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AL670379.4-201ENST00000605279 254 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AL670379.12-201ENST00000605291 253 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AL670379.8-201ENST00000605353 252 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AL670379.9-201ENST00000605428 253 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AL670379.7-201ENST00000605823 252 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AC006971.1-201ENST00000407916 4486 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CSMD3Q7Z407 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CSMD3Q7Z407 MTCO1P42-201ENST00000457379 726 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 RPL21P41-201ENST00000459863 264 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC1.75□□□□□ -2.13
CSMD3Q7Z407 FAM92A1P2-202ENST00000504766 877 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AC091917.2-201ENST00000505002 744 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC1.75□□□□□ -2.13
CSMD3Q7Z407 RANP3-201ENST00000530970 276 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 DLEU2_6.1-201ENST00000610536 112 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AL136981.2-201ENST00000617319 734 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AL162233.1-201ENST00000620014 944 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AC090897.3-201ENST00000636973 1157 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 OR10AB1P-202ENST00000641219 1686 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC1.75□□□□□ -2.13
CSMD3Q7Z407 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CSMD3Q7Z407 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
CSMD3Q7Z407 RNA5SP88-201ENST00000365560 109 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 RNU6-805P-201ENST00000365643 106 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AL583834.1-201ENST00000406943 343 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC1.75□□□□□ -2.13
CSMD3Q7Z407 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.75□□□□□ -2.13
CSMD3Q7Z407 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CSMD3Q7Z407 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AC096725.1-201ENST00000514266 313 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AC245166.1-201ENST00000521012 253 ntBASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC1.75□□□□□ -2.13
CSMD3Q7Z407 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.75□□□□□ -2.13
CSMD3Q7Z407 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 AC022031.1-201ENST00000585985 2593 ntBASIC1.74□□□□□ -2.13
CSMD3Q7Z407 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 SNORD62.1-201ENST00000362541 86 ntBASIC1.74□□□□□ -2.13
CSMD3Q7Z407 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 GTF2IP23-201ENST00000423746 351 ntBASIC1.74□□□□□ -2.13
CSMD3Q7Z407 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 RN7SL75P-201ENST00000461926 281 ntBASIC1.74□□□□□ -2.13
CSMD3Q7Z407 AC108471.1-201ENST00000513977 287 ntBASIC1.74□□□□□ -2.13
CSMD3Q7Z407 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 AL133412.1-201ENST00000380194 2992 ntBASIC1.74□□□□□ -2.13
CSMD3Q7Z407 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.74□□□□□ -2.13
CSMD3Q7Z407 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 RNU1-17P-201ENST00000363022 152 ntBASIC1.74□□□□□ -2.13
CSMD3Q7Z407 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 SKINT1L-201ENST00000401057 817 ntBASIC1.74□□□□□ -2.13
CSMD3Q7Z407 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 AC007423.1-201ENST00000605009 627 ntBASIC1.74□□□□□ -2.13
CSMD3Q7Z407 AL365503.1-201ENST00000605247 905 ntBASIC1.74□□□□□ -2.13
CSMD3Q7Z407 MIR6873-201ENST00000622788 63 ntBASIC1.74□□□□□ -2.13
CSMD3Q7Z407 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 AC080128.1-201ENST00000474389 1917 ntBASIC1.74□□□□□ -2.13
CSMD3Q7Z407 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 SNORA70E-201ENST00000384492 135 ntBASIC1.74□□□□□ -2.13
CSMD3Q7Z407 AC118282.1-201ENST00000506408 765 ntBASIC1.74□□□□□ -2.13
CSMD3Q7Z407 AC119751.1-201ENST00000513357 765 ntBASIC1.74□□□□□ -2.13
CSMD3Q7Z407 MTHFD2P4-201ENST00000515074 1025 ntBASIC1.74□□□□□ -2.13
CSMD3Q7Z407 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 AC007621.1-201ENST00000604544 437 ntBASIC1.74□□□□□ -2.13
CSMD3Q7Z407 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.74□□□□□ -2.13
CSMD3Q7Z407 USP44-208ENST00000552440 1818 ntTSL 5 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 SEPT7P3-201ENST00000455017 621 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 AC068587.2-201ENST00000478386 781 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms