Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHFQ7M4L6 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.85□□□□□ -1.79
SHFQ7M4L6 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.85□□□□□ -1.79
SHFQ7M4L6 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.85□□□□□ -1.79
SHFQ7M4L6 AL161713.1-201ENST00000555538 145 ntBASIC3.85□□□□□ -1.79
SHFQ7M4L6 AL360157.1-201ENST00000565962 87 ntBASIC3.85□□□□□ -1.79
SHFQ7M4L6 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.85□□□□□ -1.79
SHFQ7M4L6 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.85□□□□□ -1.79
SHFQ7M4L6 AC083760.1-201ENST00000589621 670 ntBASIC3.85□□□□□ -1.79
SHFQ7M4L6 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.85□□□□□ -1.79
SHFQ7M4L6 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SHFQ7M4L6 RPL23AP92-201ENST00000603609 255 ntBASIC3.85□□□□□ -1.79
SHFQ7M4L6 AC007566.2-201ENST00000603642 413 ntBASIC3.85□□□□□ -1.79
SHFQ7M4L6 AL354984.3-201ENST00000604803 325 ntBASIC3.85□□□□□ -1.79
SHFQ7M4L6 AL513477.2-201ENST00000607858 568 ntBASIC3.85□□□□□ -1.79
SHFQ7M4L6 AC211433.2-201ENST00000608433 387 ntBASIC3.85□□□□□ -1.79
SHFQ7M4L6 AL445264.1-201ENST00000621719 171 ntBASIC3.85□□□□□ -1.79
SHFQ7M4L6 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.85□□□□□ -1.79
SHFQ7M4L6 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.85□□□□□ -1.79
SHFQ7M4L6 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.85□□□□□ -1.79
SHFQ7M4L6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHFQ7M4L6 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHFQ7M4L6 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHFQ7M4L6 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHFQ7M4L6 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHFQ7M4L6 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHFQ7M4L6 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHFQ7M4L6 FAM35DP-201ENST00000323387 2712 ntBASIC3.85□□□□□ -1.79
SHFQ7M4L6 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SHFQ7M4L6 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SHFQ7M4L6 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SHFQ7M4L6 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHFQ7M4L6 AC008033.1-201ENST00000216407 1162 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 OR4K15-201ENST00000305051 1216 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 FGF7P2-201ENST00000332473 296 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 RNA5SP175-201ENST00000364275 119 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 Y_RNA.359-201ENST00000365498 102 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 SNORD82-201ENST00000365530 70 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 SNORA70F-201ENST00000384142 135 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 U8.14-201ENST00000390843 143 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 AL583835.1-201ENST00000399570 407 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 DEFB108C-201ENST00000400154 252 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.84□□□□□ -1.79
SHFQ7M4L6 RPL17P12-201ENST00000413391 526 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 AL139095.3-201ENST00000419672 1203 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 AL445669.1-201ENST00000426743 755 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 RSU1P2-202ENST00000437884 485 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 MUPP-201ENST00000438111 566 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 RPS24P1-201ENST00000438550 371 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 RPL23AP89-201ENST00000439324 255 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 AL592447.1-201ENST00000447592 540 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 RPL7P31-201ENST00000450192 724 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 AP000797.1-201ENST00000478870 387 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 HMGB1P36-201ENST00000487709 576 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.84□□□□□ -1.79
SHFQ7M4L6 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.84□□□□□ -1.79
SHFQ7M4L6 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.84□□□□□ -1.79
SHFQ7M4L6 AC024589.1-201ENST00000512207 263 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 HIGD1AP3-201ENST00000515857 278 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.84□□□□□ -1.79
SHFQ7M4L6 AC025881.1-201ENST00000518851 512 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.84□□□□□ -1.79
SHFQ7M4L6 AP003033.1-201ENST00000527244 415 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 OR5AP1P-201ENST00000529730 940 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.84□□□□□ -1.79
SHFQ7M4L6 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.84□□□□□ -1.79
SHFQ7M4L6 AC090312.1-201ENST00000580637 348 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 MIR4270-201ENST00000581799 70 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.84□□□□□ -1.79
SHFQ7M4L6 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.84□□□□□ -1.79
SHFQ7M4L6 OR4G1P-201ENST00000588632 938 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.84□□□□□ -1.79
SHFQ7M4L6 AC112187.2-201ENST00000604345 283 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.84□□□□□ -1.79
SHFQ7M4L6 BCRP9-201ENST00000605312 388 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 AC013562.2-201ENST00000611632 603 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 AL021997.2-201ENST00000615674 271 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 AC090116.1-201ENST00000615679 446 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 AL357080.1-201ENST00000617394 239 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 AC004009.2-201ENST00000623016 728 ntBASIC3.84□□□□□ -1.79
SHFQ7M4L6 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SHFQ7M4L6 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SHFQ7M4L6 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHFQ7M4L6 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SHFQ7M4L6 AL359893.1-201ENST00000447628 1580 ntBASIC3.84□□□□□ -1.8
SHFQ7M4L6 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SHFQ7M4L6 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
SHFQ7M4L6 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC006378.2-201ENST00000623178 2476 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 SNORA75-201ENST00000384158 137 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHFQ7M4L6 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.83□□□□□ -1.8
SHFQ7M4L6 MTCO3P41-201ENST00000414801 328 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 CDK8P2-201ENST00000415020 547 ntBASIC3.83□□□□□ -1.8
SHFQ7M4L6 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms