Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.07□□□□□ -1.92
UBR3Q6ZT12 MTND4P2-201ENST00000507767 1203 ntBASIC3.07□□□□□ -1.92
UBR3Q6ZT12 AC119751.1-201ENST00000513357 765 ntBASIC3.07□□□□□ -1.92
UBR3Q6ZT12 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.07□□□□□ -1.92
UBR3Q6ZT12 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UBR3Q6ZT12 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.07□□□□□ -1.92
UBR3Q6ZT12 PISRT1-201ENST00000626175 531 ntBASIC3.07□□□□□ -1.92
UBR3Q6ZT12 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.07□□□□□ -1.92
UBR3Q6ZT12 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
UBR3Q6ZT12 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
UBR3Q6ZT12 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UBR3Q6ZT12 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.07□□□□□ -1.92
UBR3Q6ZT12 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.07□□□□□ -1.92
UBR3Q6ZT12 MIR3074-201ENST00000384885 81 ntBASIC3.07□□□□□ -1.92
UBR3Q6ZT12 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.07□□□□□ -1.92
UBR3Q6ZT12 RPL23AP74-201ENST00000437246 471 ntBASIC3.07□□□□□ -1.92
UBR3Q6ZT12 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.07□□□□□ -1.92
UBR3Q6ZT12 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.07□□□□□ -1.92
UBR3Q6ZT12 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.07□□□□□ -1.92
UBR3Q6ZT12 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.07□□□□□ -1.92
UBR3Q6ZT12 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.07□□□□□ -1.92
UBR3Q6ZT12 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.07□□□□□ -1.92
UBR3Q6ZT12 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.06□□□□□ -1.92
UBR3Q6ZT12 RAD1P1-201ENST00000231383 813 ntBASIC3.06□□□□□ -1.92
UBR3Q6ZT12 RNU6-984P-201ENST00000363236 109 ntBASIC3.06□□□□□ -1.92
UBR3Q6ZT12 AL031736.2-201ENST00000426573 787 ntBASIC3.06□□□□□ -1.92
UBR3Q6ZT12 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.06□□□□□ -1.92
UBR3Q6ZT12 AC108860.1-201ENST00000484521 383 ntBASIC3.06□□□□□ -1.92
UBR3Q6ZT12 ACTR6P1-201ENST00000514311 1104 ntBASIC3.06□□□□□ -1.92
UBR3Q6ZT12 BMS1P7-201ENST00000602440 1052 ntBASIC3.06□□□□□ -1.92
UBR3Q6ZT12 NF1P10-201ENST00000613227 742 ntBASIC3.06□□□□□ -1.92
UBR3Q6ZT12 MIR7153-201ENST00000637758 57 ntBASIC3.06□□□□□ -1.92
UBR3Q6ZT12 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
UBR3Q6ZT12 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
UBR3Q6ZT12 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.06□□□□□ -1.92
UBR3Q6ZT12 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
UBR3Q6ZT12 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
UBR3Q6ZT12 RNA5SP99-201ENST00000364020 114 ntBASIC3.05□□□□□ -1.92
UBR3Q6ZT12 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UBR3Q6ZT12 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.05□□□□□ -1.92
UBR3Q6ZT12 EIF5P1-201ENST00000400019 1231 ntBASIC3.05□□□□□ -1.92
UBR3Q6ZT12 RN7SKP140-201ENST00000411196 284 ntBASIC3.05□□□□□ -1.92
UBR3Q6ZT12 VTA1P1-201ENST00000414044 866 ntBASIC3.05□□□□□ -1.92
UBR3Q6ZT12 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.05□□□□□ -1.92
UBR3Q6ZT12 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.05□□□□□ -1.92
UBR3Q6ZT12 AC021146.5-201ENST00000503544 545 ntBASIC3.05□□□□□ -1.92
UBR3Q6ZT12 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UBR3Q6ZT12 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.05□□□□□ -1.92
UBR3Q6ZT12 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.05□□□□□ -1.92
UBR3Q6ZT12 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.05□□□□□ -1.92
UBR3Q6ZT12 AC021269.2-201ENST00000532318 330 ntBASIC3.05□□□□□ -1.92
UBR3Q6ZT12 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.05□□□□□ -1.92
UBR3Q6ZT12 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UBR3Q6ZT12 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.05□□□□□ -1.92
UBR3Q6ZT12 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.05□□□□□ -1.92
UBR3Q6ZT12 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.05□□□□□ -1.92
UBR3Q6ZT12 AC126182.1-201ENST00000478134 357 ntBASIC3.05□□□□□ -1.92
UBR3Q6ZT12 OR9N1P-201ENST00000491296 333 ntBASIC3.05□□□□□ -1.92
UBR3Q6ZT12 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.05□□□□□ -1.92
UBR3Q6ZT12 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.05□□□□□ -1.92
UBR3Q6ZT12 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.05□□□□□ -1.92
UBR3Q6ZT12 AC022884.3-201ENST00000579571 248 ntBASIC3.05□□□□□ -1.92
UBR3Q6ZT12 AC046143.2-201ENST00000609789 160 ntBASIC3.05□□□□□ -1.92
UBR3Q6ZT12 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UBR3Q6ZT12 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.04□□□□□ -1.92
UBR3Q6ZT12 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.04□□□□□ -1.92
UBR3Q6ZT12 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UBR3Q6ZT12 GSTA9P-201ENST00000406231 611 ntBASIC3.04□□□□□ -1.92
UBR3Q6ZT12 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.04□□□□□ -1.92
UBR3Q6ZT12 AC104389.3-201ENST00000445629 235 ntBASIC3.04□□□□□ -1.92
UBR3Q6ZT12 RPS27P29-201ENST00000463110 252 ntBASIC3.04□□□□□ -1.92
UBR3Q6ZT12 NIPA2P2-201ENST00000496376 1083 ntBASIC3.04□□□□□ -1.92
UBR3Q6ZT12 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.04□□□□□ -1.92
UBR3Q6ZT12 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.04□□□□□ -1.92
UBR3Q6ZT12 AL109741.3-201ENST00000561748 592 ntBASIC3.04□□□□□ -1.92
UBR3Q6ZT12 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.04□□□□□ -1.92
UBR3Q6ZT12 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UBR3Q6ZT12 AL021368.2-201ENST00000606125 5352 ntBASIC3.04□□□□□ -1.92
UBR3Q6ZT12 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
UBR3Q6ZT12 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
UBR3Q6ZT12 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
UBR3Q6ZT12 AC117529.2-201ENST00000512159 2068 ntBASIC3.03□□□□□ -1.92
UBR3Q6ZT12 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.03□□□□□ -1.92
UBR3Q6ZT12 SNORA70E-201ENST00000384492 135 ntBASIC3.03□□□□□ -1.92
UBR3Q6ZT12 RNA5SP210-201ENST00000391034 120 ntBASIC3.03□□□□□ -1.92
UBR3Q6ZT12 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
UBR3Q6ZT12 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.03□□□□□ -1.92
UBR3Q6ZT12 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.03□□□□□ -1.92
UBR3Q6ZT12 MRPL50P4-201ENST00000446432 475 ntBASIC3.03□□□□□ -1.92
UBR3Q6ZT12 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
UBR3Q6ZT12 AC026436.1-201ENST00000510537 270 ntBASIC3.03□□□□□ -1.92
UBR3Q6ZT12 RNA5SP281-201ENST00000516504 135 ntBASIC3.03□□□□□ -1.92
UBR3Q6ZT12 MTCYBP19-201ENST00000517463 1124 ntBASIC3.03□□□□□ -1.92
UBR3Q6ZT12 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.03□□□□□ -1.92
UBR3Q6ZT12 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.03□□□□□ -1.92
UBR3Q6ZT12 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.03□□□□□ -1.92
UBR3Q6ZT12 AL139286.1-201ENST00000604465 483 ntBASIC3.03□□□□□ -1.92
UBR3Q6ZT12 AL136981.2-201ENST00000617319 734 ntBASIC3.03□□□□□ -1.92
UBR3Q6ZT12 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
UBR3Q6ZT12 AC010733.2-201ENST00000589496 5702 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms