Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.27□□□□□ -1.89
CCDC171Q6TFL3 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC171Q6TFL3 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC171Q6TFL3 FRG1DP-201ENST00000635586 771 ntBASIC3.27□□□□□ -1.89
CCDC171Q6TFL3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCDC171Q6TFL3 MIR592-201ENST00000384959 97 ntBASIC3.26□□□□□ -1.89
CCDC171Q6TFL3 AL512633.1-201ENST00000399931 655 ntBASIC3.26□□□□□ -1.89
CCDC171Q6TFL3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC171Q6TFL3 RPS15AP1-201ENST00000457423 391 ntBASIC3.26□□□□□ -1.89
CCDC171Q6TFL3 HAUS1P1-201ENST00000505275 832 ntBASIC3.26□□□□□ -1.89
CCDC171Q6TFL3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC171Q6TFL3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC171Q6TFL3 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
CCDC171Q6TFL3 PSMA6P4-201ENST00000603247 718 ntBASIC3.26□□□□□ -1.89
CCDC171Q6TFL3 AC007619.2-201ENST00000605743 379 ntBASIC3.26□□□□□ -1.89
CCDC171Q6TFL3 AC018754.1-201ENST00000607486 925 ntBASIC3.26□□□□□ -1.89
CCDC171Q6TFL3 AC245100.7-201ENST00000609678 442 ntBASIC3.26□□□□□ -1.89
CCDC171Q6TFL3 AL359198.2-201ENST00000611836 194 ntBASIC3.26□□□□□ -1.89
CCDC171Q6TFL3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC171Q6TFL3 AC109315.1-201ENST00000584143 1347 ntBASIC3.26□□□□□ -1.89
CCDC171Q6TFL3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC171Q6TFL3 ANKRD36P1-201ENST00000344424 659 ntBASIC3.25□□□□□ -1.89
CCDC171Q6TFL3 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC171Q6TFL3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.25□□□□□ -1.89
CCDC171Q6TFL3 USP9YP36-201ENST00000424581 829 ntBASIC3.25□□□□□ -1.89
CCDC171Q6TFL3 RPL36AP6-201ENST00000435770 321 ntBASIC3.25□□□□□ -1.89
CCDC171Q6TFL3 COX6CP8-201ENST00000522620 226 ntBASIC3.25□□□□□ -1.89
CCDC171Q6TFL3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.25□□□□□ -1.89
CCDC171Q6TFL3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC171Q6TFL3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC171Q6TFL3 RPL12P50-201ENST00000603116 116 ntBASIC3.25□□□□□ -1.89
CCDC171Q6TFL3 AC008277.2-201ENST00000605196 797 ntBASIC3.25□□□□□ -1.89
CCDC171Q6TFL3 ATP1B3P1-201ENST00000605365 821 ntBASIC3.25□□□□□ -1.89
CCDC171Q6TFL3 AC090425.2-201ENST00000608818 501 ntBASIC3.25□□□□□ -1.89
CCDC171Q6TFL3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC171Q6TFL3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC171Q6TFL3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 ARF4P3-201ENST00000397387 509 ntBASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 UBE2V1P2-201ENST00000397758 440 ntBASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 AC104332.2-201ENST00000429959 156 ntBASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 ST13P20-201ENST00000447996 1065 ntBASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 RPL23AP31-201ENST00000456160 467 ntBASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 AC010683.1-201ENST00000473673 378 ntBASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 RNU6-826P-201ENST00000516827 104 ntBASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 AC104986.1-201ENST00000517978 436 ntBASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 AC027309.2-201ENST00000520566 192 ntBASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 MIR4319-201ENST00000577285 85 ntBASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 AC138761.3-201ENST00000579993 334 ntBASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 NF1P5-201ENST00000588287 448 ntBASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 AC002076.2-201ENST00000617362 122 ntBASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 AP003485.2-201ENST00000623636 610 ntBASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 TAB3P1-202ENST00000452645 1634 ntBASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.24□□□□□ -1.89
CCDC171Q6TFL3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 MIR9-1-201ENST00000385198 89 ntBASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 AL360182.1-201ENST00000397433 468 ntBASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 AC073508.1-201ENST00000428866 656 ntBASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 AC008571.1-201ENST00000467232 300 ntBASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 AC005921.1-201ENST00000510589 286 ntBASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 RPL23AP94-201ENST00000512518 302 ntBASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 AL049874.4-201ENST00000557593 255 ntBASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 VN1R90P-201ENST00000595717 726 ntBASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 AC243756.2-201ENST00000618406 463 ntBASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 MTCO1P8-201ENST00000416914 1523 ntBASIC3.23□□□□□ -1.89
CCDC171Q6TFL3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
CCDC171Q6TFL3 AL356057.3-201ENST00000402607 340 ntBASIC3.22□□□□□ -1.89
CCDC171Q6TFL3 VN1R31P-201ENST00000417498 730 ntBASIC3.22□□□□□ -1.89
CCDC171Q6TFL3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC171Q6TFL3 HMGN2P20-201ENST00000437531 273 ntBASIC3.22□□□□□ -1.89
CCDC171Q6TFL3 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC171Q6TFL3 HMGB3P15-201ENST00000507326 574 ntBASIC3.22□□□□□ -1.89
CCDC171Q6TFL3 ARL4AP2-201ENST00000507378 601 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms