Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.46□□□□□ -1.69
RNF220Q5VTB9 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 RNU6-348P-201ENST00000384386 107 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 RNU6-297P-201ENST00000384636 107 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 RNU11-4P-201ENST00000391149 133 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 HSPD1P16-201ENST00000402302 394 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 FCF1P10-201ENST00000407590 479 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 AC078974.1-201ENST00000411597 223 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 RPS3AP3-201ENST00000411933 242 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 GJA6P-201ENST00000415117 1042 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 RPS7P15-201ENST00000415804 584 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 AL451139.1-201ENST00000434718 346 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 PGBD4P3-201ENST00000440731 581 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 ACTR3P3-201ENST00000480448 893 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 RPL23AP41-201ENST00000484754 458 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 AC140172.1-201ENST00000502928 141 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 MRPS33P2-201ENST00000507850 322 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 RNU6-1095P-201ENST00000516148 108 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 RNA5SP34-201ENST00000516887 130 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 AP003467.2-201ENST00000520175 319 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 IFITM8P-201ENST00000522529 394 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 AC126177.3-201ENST00000551839 688 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 AL121603.1-201ENST00000553815 142 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 AC137800.2-201ENST00000574375 120 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 MIR4528-201ENST00000577763 90 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 AC092354.2-201ENST00000607786 514 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 AC009159.1-201ENST00000618386 642 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 AC010149.2-201ENST00000637608 315 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 MTCO1P11-201ENST00000429111 1528 ntBASIC4.46□□□□□ -1.7
RNF220Q5VTB9 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
RNF220Q5VTB9 AC099654.2-201ENST00000433031 1980 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AC067945.1-201ENST00000342609 618 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 RNU6-1042P-201ENST00000384204 107 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 RNU6-114P-201ENST00000384704 105 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 RPL23AP48-201ENST00000406913 488 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 ZNF885P-201ENST00000420174 1098 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AL353777.1-201ENST00000425552 326 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AL022238.1-201ENST00000442557 355 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 SLC25A18P1-201ENST00000449385 454 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 UBDP1-202ENST00000457888 382 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AC005532.2-201ENST00000467154 373 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 RPL7P24-201ENST00000493052 752 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AC108022.1-201ENST00000493466 478 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 NDUFB4P2-201ENST00000509515 391 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 RNA5SP92-201ENST00000516437 110 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 RNU6-405P-201ENST00000516637 110 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 RNU6-528P-201ENST00000516926 100 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AP000907.2-201ENST00000530827 353 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AL049839.1-201ENST00000556151 657 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AL157394.1-201ENST00000562983 1224 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 AC015912.2-201ENST00000571053 181 ntBASIC4.45□□□□□ -1.7
RNF220Q5VTB9 UBE2L4-201ENST00000587688 464 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms