Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC087477.6-201ENST00000559595 843 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 AC137800.2-201ENST00000574375 120 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 AC009977.1-201ENST00000586015 570 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 AC006566.1-201ENST00000608943 513 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 AC087241.4-201ENST00000612441 480 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 AL590099.1-201ENST00000615276 138 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 AC002550.2-201ENST00000621246 394 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 AC005086.4-201ENST00000623065 213 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 AC009902.3-201ENST00000606235 2172 ntBASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC144BQ3MJ40 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AC092447.7-201ENST00000422212 1621 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AC244517.1-201ENST00000606030 2086 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 SNORA73.1-201ENST00000363107 205 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 U3.15-201ENST00000365398 212 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 RPL7P25-201ENST00000404151 721 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 RN7SKP235-201ENST00000410662 305 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 USP9YP14-201ENST00000430663 563 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 RPEP2-201ENST00000432149 701 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 PGBD4P3-201ENST00000440731 581 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AC244505.5-201ENST00000443639 207 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 ELOCP30-201ENST00000447108 299 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AC012170.1-201ENST00000495139 359 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 RNU6-720P-201ENST00000516363 108 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AL110118.1-201ENST00000553543 400 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AC009101.1-201ENST00000568135 242 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AC090616.5-202ENST00000582111 297 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AL031176.1-201ENST00000604554 466 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 RNU6-87P-201ENST00000607561 108 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AL356585.4-201ENST00000623078 1229 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AC010149.2-201ENST00000637608 315 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 AC008079.2-201ENST00000623543 20396 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 MUC2-202ENST00000613187 4845 ntBASIC5.45□□□□□ -1.54
CCDC144BQ3MJ40 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 MIR129-1-201ENST00000384972 72 ntBASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 RNU6-248P-201ENST00000410720 107 ntBASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 RNU2-8P-201ENST00000410727 190 ntBASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 CHIAP3-201ENST00000423668 1133 ntBASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 AL353777.1-201ENST00000425552 326 ntBASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 MTND4LP10-201ENST00000435146 291 ntBASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 NMNAT1P2-201ENST00000435192 860 ntBASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 AC073614.1-201ENST00000438690 650 ntBASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 RABEPKP1-201ENST00000440529 1026 ntBASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 AC114495.1-201ENST00000441274 436 ntBASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 AC104308.1-201ENST00000454621 333 ntBASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 NDUFB4P2-201ENST00000509515 391 ntBASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC144BQ3MJ40 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 FARSBP1-201ENST00000435808 1778 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 RNU6-297P-201ENST00000384636 107 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 RNU6-648P-201ENST00000410190 107 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms