Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN6P56747 PNRC2P1-201ENST00000423940 420 ntBASIC3.12□□□□□ -1.91
CLDN6P56747 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN6P56747 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN6P56747 NF1P3-201ENST00000457709 450 ntBASIC3.12□□□□□ -1.91
CLDN6P56747 VN1R17P-201ENST00000472048 1090 ntBASIC3.12□□□□□ -1.91
CLDN6P56747 AC087879.1-201ENST00000474343 374 ntBASIC3.12□□□□□ -1.91
CLDN6P56747 RPS27AP1-201ENST00000475545 471 ntBASIC3.12□□□□□ -1.91
CLDN6P56747 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN6P56747 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN6P56747 AF279873.1-201ENST00000523393 313 ntBASIC3.12□□□□□ -1.91
CLDN6P56747 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN6P56747 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.12□□□□□ -1.91
CLDN6P56747 SYF2P1-201ENST00000550658 413 ntBASIC3.12□□□□□ -1.91
CLDN6P56747 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN6P56747 AC034105.3-201ENST00000565294 442 ntBASIC3.12□□□□□ -1.91
CLDN6P56747 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN6P56747 BNIP3P38-201ENST00000601117 544 ntBASIC3.12□□□□□ -1.91
CLDN6P56747 AL390838.2-201ENST00000602394 274 ntBASIC3.12□□□□□ -1.91
CLDN6P56747 AC073657.2-201ENST00000605661 303 ntBASIC3.12□□□□□ -1.91
CLDN6P56747 AC090425.2-201ENST00000608818 501 ntBASIC3.12□□□□□ -1.91
CLDN6P56747 MIR1264-201ENST00000616374 69 ntBASIC3.12□□□□□ -1.91
CLDN6P56747 AL109659.3-201ENST00000624985 950 ntBASIC3.12□□□□□ -1.91
CLDN6P56747 AC092608.3-201ENST00000625017 386 ntBASIC3.12□□□□□ -1.91
CLDN6P56747 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN6P56747 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN6P56747 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN6P56747 SEC63P2-201ENST00000503863 1939 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN6P56747 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN6P56747 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN6P56747 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN6P56747 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN6P56747 CR383658.2-201ENST00000547576 1525 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 RNU6-1339P-201ENST00000363574 91 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 AL356057.1-202ENST00000402263 756 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 RNU6-272P-201ENST00000411028 104 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN6P56747 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN6P56747 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN6P56747 VDAC1P3-201ENST00000434069 851 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN6P56747 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN6P56747 AL513321.1-201ENST00000441175 761 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN6P56747 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 MRPS31P2-201ENST00000451581 518 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 AC008481.1-201ENST00000463278 396 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 RPL23AP14-201ENST00000468281 468 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.11□□□□□ -1.91
CLDN6P56747 AC015724.1-201ENST00000478577 156 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 RPL7P47-201ENST00000497299 556 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN6P56747 RNU6-202P-201ENST00000515998 96 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 AC103833.1-201ENST00000517442 172 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN6P56747 TGIF1P1-201ENST00000558095 802 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN6P56747 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN6P56747 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN6P56747 AC233266.2-201ENST00000567067 528 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.11□□□□□ -1.91
CLDN6P56747 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 AC022149.2-201ENST00000621061 203 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 AP003400.6-201ENST00000624698 740 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN6P56747 FRG1DP-201ENST00000635586 771 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN6P56747 AL353746.1-201ENST00000566293 6881 ntBASIC3.11□□□□□ -1.91
CLDN6P56747 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN6P56747 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN6P56747 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN6P56747 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN6P56747 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN6P56747 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN6P56747 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN6P56747 MTND5P11-201ENST00000511037 1812 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 AL513302.2-201ENST00000562313 1842 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
CLDN6P56747 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN6P56747 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN6P56747 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CLDN6P56747 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CLDN6P56747 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN6P56747 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN6P56747 BX890604.2-201ENST00000427883 474 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 AL353705.1-201ENST00000433468 480 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 AL590103.1-201ENST00000434488 307 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CLDN6P56747 HMGB1P12-201ENST00000438594 598 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN6P56747 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN6P56747 Z99714.1-201ENST00000450463 807 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 AL035407.2-201ENST00000454090 378 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 HMGN2P16-201ENST00000456802 261 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 SYPL1P1-201ENST00000473622 768 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 AP000893.1-201ENST00000474462 794 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN6P56747 RNU6-1073P-201ENST00000517182 106 ntBASIC3.1□□□□□ -1.91
CLDN6P56747 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms