Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.53□□□□□ -2
CMC4P56277 LSM6P2-201ENST00000552208 177 ntBASIC2.53□□□□□ -2
CMC4P56277 GTF2IP22-201ENST00000554443 182 ntBASIC2.53□□□□□ -2
CMC4P56277 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.53□□□□□ -2
CMC4P56277 CYP2C60P-201ENST00000566088 139 ntBASIC2.53□□□□□ -2
CMC4P56277 AC141257.3-201ENST00000572906 215 ntBASIC2.53□□□□□ -2
CMC4P56277 BNIP3P33-201ENST00000598912 569 ntBASIC2.53□□□□□ -2
CMC4P56277 AC073657.2-201ENST00000605661 303 ntBASIC2.53□□□□□ -2
CMC4P56277 AL590282.1-201ENST00000610379 1136 ntBASIC2.53□□□□□ -2
CMC4P56277 AL157817.1-201ENST00000614264 790 ntBASIC2.53□□□□□ -2
CMC4P56277 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.53□□□□□ -2
CMC4P56277 MIR7153-201ENST00000637758 57 ntBASIC2.53□□□□□ -2
CMC4P56277 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC2.53□□□□□ -2
CMC4P56277 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CMC4P56277 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.53□□□□□ -2.01
CMC4P56277 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2.01
CMC4P56277 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CMC4P56277 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.52□□□□□ -2.01
CMC4P56277 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC2.52□□□□□ -2.01
CMC4P56277 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CMC4P56277 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CMC4P56277 RNU4-35P-201ENST00000362588 141 ntBASIC2.52□□□□□ -2.01
CMC4P56277 RNU6-761P-201ENST00000384148 107 ntBASIC2.52□□□□□ -2.01
CMC4P56277 SNORD116-23-201ENST00000384645 92 ntBASIC2.52□□□□□ -2.01
CMC4P56277 MIR34B-201ENST00000385076 84 ntBASIC2.52□□□□□ -2.01
CMC4P56277 MTND4LP20-201ENST00000402379 270 ntBASIC2.52□□□□□ -2.01
CMC4P56277 RNU2-71P-201ENST00000411395 189 ntBASIC2.52□□□□□ -2.01
CMC4P56277 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.52□□□□□ -2.01
CMC4P56277 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.52□□□□□ -2.01
CMC4P56277 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.52□□□□□ -2.01
CMC4P56277 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.52□□□□□ -2.01
CMC4P56277 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.52□□□□□ -2.01
CMC4P56277 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.52□□□□□ -2.01
CMC4P56277 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.52□□□□□ -2.01
CMC4P56277 RPF2P1-201ENST00000424137 906 ntBASIC2.52□□□□□ -2.01
CMC4P56277 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.52□□□□□ -2.01
CMC4P56277 RPL23AP16-201ENST00000441715 421 ntBASIC2.52□□□□□ -2.01
CMC4P56277 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CMC4P56277 PRSS3P4-201ENST00000453323 162 ntBASIC2.52□□□□□ -2.01
CMC4P56277 AC006539.3-201ENST00000454258 129 ntBASIC2.52□□□□□ -2.01
CMC4P56277 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.52□□□□□ -2.01
CMC4P56277 HMGN2P16-201ENST00000456802 261 ntBASIC2.52□□□□□ -2.01
CMC4P56277 snoU13.24-201ENST00000458998 104 ntBASIC2.52□□□□□ -2.01
CMC4P56277 RPL21P18-201ENST00000469899 480 ntBASIC2.52□□□□□ -2.01
CMC4P56277 RN7SL807P-201ENST00000470923 297 ntBASIC2.52□□□□□ -2.01
CMC4P56277 GAPDHP39-201ENST00000481866 979 ntBASIC2.52□□□□□ -2.01
CMC4P56277 RPS4XP13-201ENST00000483219 789 ntBASIC2.52□□□□□ -2.01
CMC4P56277 AC091860.1-201ENST00000505723 432 ntBASIC2.52□□□□□ -2.01
CMC4P56277 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CMC4P56277 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.52□□□□□ -2.01
CMC4P56277 RNU5A-7P-201ENST00000515979 116 ntBASIC2.52□□□□□ -2.01
CMC4P56277 SNORA70.18-201ENST00000516696 98 ntBASIC2.52□□□□□ -2.01
CMC4P56277 IGKV2-26-201ENST00000518305 343 ntBASIC2.52□□□□□ -2.01
CMC4P56277 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.52□□□□□ -2.01
CMC4P56277 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.52□□□□□ -2.01
CMC4P56277 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.52□□□□□ -2.01
CMC4P56277 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.52□□□□□ -2.01
CMC4P56277 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CMC4P56277 OR4R2P-201ENST00000530815 597 ntBASIC2.52□□□□□ -2.01
CMC4P56277 AC109635.4-202ENST00000531666 412 ntBASIC2.52□□□□□ -2.01
CMC4P56277 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.52□□□□□ -2.01
CMC4P56277 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CMC4P56277 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.52□□□□□ -2.01
CMC4P56277 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.52□□□□□ -2.01
CMC4P56277 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.52□□□□□ -2.01
CMC4P56277 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.52□□□□□ -2.01
CMC4P56277 MIR4444-1-201ENST00000581696 74 ntBASIC2.52□□□□□ -2.01
CMC4P56277 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.52□□□□□ -2.01
CMC4P56277 MIR4444-2-201ENST00000584390 74 ntBASIC2.52□□□□□ -2.01
CMC4P56277 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.52□□□□□ -2.01
CMC4P56277 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.52□□□□□ -2.01
CMC4P56277 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.52□□□□□ -2.01
CMC4P56277 AC120053.1-201ENST00000607706 736 ntBASIC2.52□□□□□ -2.01
CMC4P56277 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.52□□□□□ -2.01
CMC4P56277 AC090116.1-201ENST00000615679 446 ntBASIC2.52□□□□□ -2.01
CMC4P56277 VN1R7P-201ENST00000619242 903 ntBASIC2.52□□□□□ -2.01
CMC4P56277 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.52□□□□□ -2.01
CMC4P56277 OR8B1P-202ENST00000641132 1178 ntBASIC2.52□□□□□ -2.01
CMC4P56277 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
CMC4P56277 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CMC4P56277 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CMC4P56277 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CMC4P56277 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.52□□□□□ -2.01
CMC4P56277 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CMC4P56277 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.51□□□□□ -2.01
CMC4P56277 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CMC4P56277 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CMC4P56277 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CMC4P56277 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CMC4P56277 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CMC4P56277 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CMC4P56277 RNU6-600P-201ENST00000362524 99 ntBASIC2.51□□□□□ -2.01
CMC4P56277 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CMC4P56277 RNU6-1181P-201ENST00000384191 106 ntBASIC2.51□□□□□ -2.01
CMC4P56277 Y_RNA.493-201ENST00000384422 102 ntBASIC2.51□□□□□ -2.01
CMC4P56277 MIR670-201ENST00000390142 98 ntBASIC2.51□□□□□ -2.01
CMC4P56277 RNU6-575P-201ENST00000411326 105 ntBASIC2.51□□□□□ -2.01
CMC4P56277 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.51□□□□□ -2.01
CMC4P56277 RHEBP3-201ENST00000411920 351 ntBASIC2.51□□□□□ -2.01
CMC4P56277 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms