Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 SNORA57.1-201ENST00000391227 145 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PKNOX1P55347 SSXP10-201ENST00000402595 565 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 MTCO2P31-201ENST00000402702 684 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 AL355615.1-201ENST00000406187 641 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 RNA5SP44-201ENST00000410446 133 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 AC027644.1-201ENST00000419595 298 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.23□□□□□ -1.89
PKNOX1P55347 CST9LP2-201ENST00000437612 320 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 AC092641.1-201ENST00000440229 772 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 AC092754.2-201ENST00000463506 460 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 RPL5P24-201ENST00000463742 885 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.23□□□□□ -1.89
PKNOX1P55347 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.23□□□□□ -1.89
PKNOX1P55347 AC093801.2-201ENST00000503966 1050 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 KCTD9P5-201ENST00000504141 1170 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 AC118282.2-201ENST00000508739 374 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 APOOP4-201ENST00000513530 597 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 AC112198.4-201ENST00000515450 351 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.23□□□□□ -1.89
PKNOX1P55347 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.23□□□□□ -1.89
PKNOX1P55347 AP000790.1-201ENST00000528891 737 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 MTCYBP41-201ENST00000528913 1123 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.23□□□□□ -1.89
PKNOX1P55347 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.23□□□□□ -1.89
PKNOX1P55347 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.23□□□□□ -1.89
PKNOX1P55347 AC084824.1-201ENST00000550917 1005 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.23□□□□□ -1.89
PKNOX1P55347 OR4T1P-201ENST00000554933 911 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.23□□□□□ -1.89
PKNOX1P55347 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.23□□□□□ -1.89
PKNOX1P55347 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
PKNOX1P55347 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.23□□□□□ -1.89
PKNOX1P55347 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PKNOX1P55347 uc_338.1-201ENST00000612113 180 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 AC005156.1-201ENST00000613371 573 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 VN1R7P-201ENST00000619242 903 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
PKNOX1P55347 AC127502.3-201ENST00000636170 1206 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.23□□□□□ -1.89
PKNOX1P55347 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PKNOX1P55347 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
PKNOX1P55347 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PKNOX1P55347 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.23□□□□□ -1.89
PKNOX1P55347 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PKNOX1P55347 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PKNOX1P55347 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PKNOX1P55347 AL079305.1-201ENST00000623159 3008 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PKNOX1P55347 MCTS2P-201ENST00000394552 546 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.22□□□□□ -1.89
PKNOX1P55347 CYCSP19-201ENST00000411715 316 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 SYF2P2-201ENST00000417620 583 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 OFD1P18Y-201ENST00000420889 959 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 AC096632.1-201ENST00000427395 310 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.22□□□□□ -1.89
PKNOX1P55347 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.22□□□□□ -1.89
PKNOX1P55347 AC091390.1-201ENST00000433904 331 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 AC073063.1-201ENST00000434352 607 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.22□□□□□ -1.89
PKNOX1P55347 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.22□□□□□ -1.89
PKNOX1P55347 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.22□□□□□ -1.89
PKNOX1P55347 RPL21P23-201ENST00000446654 460 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 HMGN1P5-201ENST00000448591 263 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 AL034418.1-201ENST00000448675 860 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.22□□□□□ -1.89
PKNOX1P55347 RPL21P104-201ENST00000464143 478 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 AC025518.1-201ENST00000479856 347 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.22□□□□□ -1.89
PKNOX1P55347 MTND4LP31-201ENST00000514859 294 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 PAICSP4-201ENST00000517543 1253 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 IGKV2-26-201ENST00000518305 343 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 AC245166.1-201ENST00000521012 253 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.22□□□□□ -1.89
PKNOX1P55347 AP001207.1-201ENST00000524051 481 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.22□□□□□ -1.89
PKNOX1P55347 AP003066.2-201ENST00000529375 555 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 AC010198.2-201ENST00000550612 259 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 AC005476.1-201ENST00000554427 397 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
PKNOX1P55347 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.22□□□□□ -1.89
PKNOX1P55347 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.22□□□□□ -1.89
PKNOX1P55347 AC023825.1-201ENST00000566704 1030 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 AC074051.3-201ENST00000570238 358 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.22□□□□□ -1.89
PKNOX1P55347 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.22□□□□□ -1.89
PKNOX1P55347 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.22□□□□□ -1.89
PKNOX1P55347 AL009028.1-201ENST00000604895 802 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 AC092574.1-201ENST00000609771 420 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.22□□□□□ -1.89
PKNOX1P55347 AP000943.4-201ENST00000622912 357 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 AC243312.2-201ENST00000623340 601 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 AC092184.1-201ENST00000625042 715 ntBASIC3.22□□□□□ -1.89
PKNOX1P55347 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PKNOX1P55347 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PKNOX1P55347 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.22□□□□□ -1.89
PKNOX1P55347 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PKNOX1P55347 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
PKNOX1P55347 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms