Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH12P55289 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH12P55289 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH12P55289 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH12P55289 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH12P55289 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH12P55289 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH12P55289 TEX21P-201ENST00000447107 1476 ntBASIC3.95□□□□□ -1.78
CDH12P55289 AC079741.1-201ENST00000321498 212 ntBASIC3.95□□□□□ -1.78
CDH12P55289 RNU6-348P-201ENST00000384386 107 ntBASIC3.95□□□□□ -1.78
CDH12P55289 ENSAP1-201ENST00000392855 326 ntBASIC3.95□□□□□ -1.78
CDH12P55289 BTBD10P2-201ENST00000404779 676 ntBASIC3.95□□□□□ -1.78
CDH12P55289 RN7SKP266-201ENST00000410232 287 ntBASIC3.95□□□□□ -1.78
CDH12P55289 RNA5SP306-201ENST00000411087 107 ntBASIC3.95□□□□□ -1.78
CDH12P55289 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH12P55289 JKAMPP1-201ENST00000413804 919 ntBASIC3.95□□□□□ -1.78
CDH12P55289 TMSB10P2-201ENST00000416049 131 ntBASIC3.95□□□□□ -1.78
CDH12P55289 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.95□□□□□ -1.78
CDH12P55289 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH12P55289 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH12P55289 AL592293.2-201ENST00000422292 996 ntBASIC3.95□□□□□ -1.78
CDH12P55289 RPS27AP7-201ENST00000422792 455 ntBASIC3.95□□□□□ -1.78
CDH12P55289 EIF1P3-201ENST00000423841 334 ntBASIC3.95□□□□□ -1.78
CDH12P55289 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDH12P55289 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH12P55289 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDH12P55289 AL035410.1-201ENST00000427409 427 ntBASIC3.95□□□□□ -1.78
CDH12P55289 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH12P55289 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH12P55289 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH12P55289 RPL23AP74-201ENST00000437246 471 ntBASIC3.95□□□□□ -1.78
CDH12P55289 RPL23AP89-201ENST00000439324 255 ntBASIC3.95□□□□□ -1.78
CDH12P55289 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH12P55289 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH12P55289 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH12P55289 AC239367.2-201ENST00000447309 705 ntBASIC3.95□□□□□ -1.78
CDH12P55289 AL451050.1-201ENST00000450126 415 ntBASIC3.95□□□□□ -1.78
CDH12P55289 AC005297.2-201ENST00000450430 606 ntBASIC3.95□□□□□ -1.78
CDH12P55289 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH12P55289 AC133473.1-201ENST00000455173 299 ntBASIC3.95□□□□□ -1.78
CDH12P55289 PLGLA-201ENST00000465668 449 ntBASIC3.95□□□□□ -1.78
CDH12P55289 HMGB1P36-201ENST00000487709 576 ntBASIC3.95□□□□□ -1.78
CDH12P55289 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH12P55289 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDH12P55289 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH12P55289 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.95□□□□□ -1.78
CDH12P55289 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH12P55289 FABP5P5-201ENST00000515537 406 ntBASIC3.95□□□□□ -1.78
CDH12P55289 SNORD116-26-201ENST00000516006 96 ntBASIC3.95□□□□□ -1.78
CDH12P55289 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH12P55289 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH12P55289 COX6CP8-201ENST00000522620 226 ntBASIC3.95□□□□□ -1.78
CDH12P55289 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDH12P55289 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH12P55289 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH12P55289 AC006064.5-201ENST00000541782 248 ntBASIC3.95□□□□□ -1.78
CDH12P55289 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH12P55289 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH12P55289 AC092470.1-201ENST00000546187 132 ntBASIC3.95□□□□□ -1.78
CDH12P55289 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH12P55289 AC084757.1-201ENST00000559987 490 ntBASIC3.95□□□□□ -1.78
CDH12P55289 HMGB3P26-201ENST00000560051 582 ntBASIC3.95□□□□□ -1.78
CDH12P55289 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH12P55289 AP001180.3-201ENST00000582221 145 ntBASIC3.95□□□□□ -1.78
CDH12P55289 MIR4307-201ENST00000582802 84 ntBASIC3.95□□□□□ -1.78
CDH12P55289 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH12P55289 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH12P55289 PRELID3BP8-201ENST00000604148 295 ntBASIC3.95□□□□□ -1.78
CDH12P55289 AC112187.2-201ENST00000604345 283 ntBASIC3.95□□□□□ -1.78
CDH12P55289 AC090186.1-201ENST00000605991 572 ntBASIC3.95□□□□□ -1.78
CDH12P55289 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.95□□□□□ -1.78
CDH12P55289 AC012409.3-201ENST00000611343 981 ntBASIC3.95□□□□□ -1.78
CDH12P55289 AC064801.1-201ENST00000612025 407 ntBASIC3.95□□□□□ -1.78
CDH12P55289 AC233309.1-201ENST00000619522 751 ntBASIC3.95□□□□□ -1.78
CDH12P55289 AC009318.4-201ENST00000620496 486 ntBASIC3.95□□□□□ -1.78
CDH12P55289 AL359740.1-201ENST00000624340 592 ntBASIC3.95□□□□□ -1.78
CDH12P55289 AL356121.2-201ENST00000624715 780 ntBASIC3.95□□□□□ -1.78
CDH12P55289 CYP3A51P-201ENST00000633513 256 ntBASIC3.95□□□□□ -1.78
CDH12P55289 AC093591.3-201ENST00000634516 308 ntBASIC3.95□□□□□ -1.78
CDH12P55289 FAM157B-203ENST00000639350 358 ntBASIC3.95□□□□□ -1.78
CDH12P55289 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CDH12P55289 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH12P55289 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH12P55289 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CDH12P55289 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH12P55289 AC006378.2-201ENST00000623178 2476 ntBASIC3.95□□□□□ -1.78
CDH12P55289 OR56B2P-202ENST00000641377 2453 ntBASIC3.95□□□□□ -1.78
CDH12P55289 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH12P55289 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH12P55289 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH12P55289 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH12P55289 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CDH12P55289 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CDH12P55289 SAGE4P-201ENST00000442271 3381 ntBASIC3.94□□□□□ -1.78
CDH12P55289 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CDH12P55289 MIR331-201ENST00000362302 94 ntBASIC3.94□□□□□ -1.78
CDH12P55289 RNA5SP175-201ENST00000364275 119 ntBASIC3.94□□□□□ -1.78
CDH12P55289 RNU5E-5P-201ENST00000365379 116 ntBASIC3.94□□□□□ -1.78
CDH12P55289 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.94□□□□□ -1.78
CDH12P55289 RPL31P1-201ENST00000398116 372 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms