Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RPL23AP84-201ENST00000571193 464 ntBASIC3.52□□□□□ -1.85
CLTCL1P53675 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.52□□□□□ -1.85
CLTCL1P53675 OR4G1P-202ENST00000641173 1788 ntBASIC3.52□□□□□ -1.85
CLTCL1P53675 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLTCL1P53675 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLTCL1P53675 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.52□□□□□ -1.85
CLTCL1P53675 Z73965.1-201ENST00000623412 2297 ntBASIC3.52□□□□□ -1.85
CLTCL1P53675 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CLTCL1P53675 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLTCL1P53675 RNU6-618P-201ENST00000363518 112 ntBASIC3.52□□□□□ -1.85
CLTCL1P53675 AL590290.1-201ENST00000405336 380 ntBASIC3.52□□□□□ -1.85
CLTCL1P53675 AL390023.1-201ENST00000428836 262 ntBASIC3.52□□□□□ -1.85
CLTCL1P53675 AL356320.1-201ENST00000429616 163 ntBASIC3.52□□□□□ -1.85
CLTCL1P53675 HIGD1AP2-201ENST00000446367 280 ntBASIC3.52□□□□□ -1.85
CLTCL1P53675 RPL23AP23-201ENST00000452590 471 ntBASIC3.52□□□□□ -1.85
CLTCL1P53675 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.52□□□□□ -1.85
CLTCL1P53675 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.52□□□□□ -1.85
CLTCL1P53675 VN1R17P-201ENST00000472048 1090 ntBASIC3.52□□□□□ -1.85
CLTCL1P53675 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.52□□□□□ -1.85
CLTCL1P53675 KLHL2P1-201ENST00000508691 521 ntBASIC3.52□□□□□ -1.85
CLTCL1P53675 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.52□□□□□ -1.85
CLTCL1P53675 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.52□□□□□ -1.85
CLTCL1P53675 MIR5092-201ENST00000583139 88 ntBASIC3.52□□□□□ -1.85
CLTCL1P53675 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.52□□□□□ -1.85
CLTCL1P53675 VN1R79P-201ENST00000593540 513 ntBASIC3.52□□□□□ -1.85
CLTCL1P53675 AL392112.1-201ENST00000605115 829 ntBASIC3.52□□□□□ -1.85
CLTCL1P53675 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
CLTCL1P53675 BX005019.1-201ENST00000561881 1810 ntBASIC3.51□□□□□ -1.85
CLTCL1P53675 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.51□□□□□ -1.85
CLTCL1P53675 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLTCL1P53675 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CLTCL1P53675 Z98742.3-201ENST00000418637 326 ntBASIC3.51□□□□□ -1.85
CLTCL1P53675 AL162388.1-201ENST00000450912 352 ntBASIC3.51□□□□□ -1.85
CLTCL1P53675 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.51□□□□□ -1.85
CLTCL1P53675 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.51□□□□□ -1.85
CLTCL1P53675 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.51□□□□□ -1.85
CLTCL1P53675 EEF1A1P37-201ENST00000522748 715 ntBASIC3.51□□□□□ -1.85
CLTCL1P53675 OR7K1P-201ENST00000546439 926 ntBASIC3.51□□□□□ -1.85
CLTCL1P53675 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.51□□□□□ -1.85
CLTCL1P53675 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLTCL1P53675 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CLTCL1P53675 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CLTCL1P53675 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CLTCL1P53675 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLTCL1P53675 EIF5P1-201ENST00000400019 1231 ntBASIC3.5□□□□□ -1.85
CLTCL1P53675 RNU2-6P-201ENST00000411404 190 ntBASIC3.5□□□□□ -1.85
CLTCL1P53675 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.5□□□□□ -1.85
CLTCL1P53675 MRPS33P4-201ENST00000434892 317 ntBASIC3.5□□□□□ -1.85
CLTCL1P53675 AC104058.1-201ENST00000448028 297 ntBASIC3.5□□□□□ -1.85
CLTCL1P53675 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.5□□□□□ -1.85
CLTCL1P53675 AC008716.1-201ENST00000511084 513 ntBASIC3.5□□□□□ -1.85
CLTCL1P53675 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLTCL1P53675 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CLTCL1P53675 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.5□□□□□ -1.85
CLTCL1P53675 AC241585.2-209ENST00000638217 143 ntBASIC3.5□□□□□ -1.85
CLTCL1P53675 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLTCL1P53675 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLTCL1P53675 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CLTCL1P53675 PNPT1P2-201ENST00000456768 2050 ntBASIC3.5□□□□□ -1.85
CLTCL1P53675 AC022031.1-201ENST00000585985 2593 ntBASIC3.49□□□□□ -1.85
CLTCL1P53675 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CLTCL1P53675 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.49□□□□□ -1.85
CLTCL1P53675 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLTCL1P53675 RN7SKP123-201ENST00000410732 291 ntBASIC3.49□□□□□ -1.85
CLTCL1P53675 AL135786.1-201ENST00000415892 214 ntBASIC3.49□□□□□ -1.85
CLTCL1P53675 RPL23AP11-201ENST00000475260 469 ntBASIC3.49□□□□□ -1.85
CLTCL1P53675 LINC00888-204ENST00000487386 421 ntBASIC3.49□□□□□ -1.85
CLTCL1P53675 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.49□□□□□ -1.85
CLTCL1P53675 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.49□□□□□ -1.85
CLTCL1P53675 ACTR6P1-201ENST00000514311 1104 ntBASIC3.49□□□□□ -1.85
CLTCL1P53675 AL442163.2-201ENST00000553912 710 ntBASIC3.49□□□□□ -1.85
CLTCL1P53675 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.49□□□□□ -1.85
CLTCL1P53675 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.49□□□□□ -1.85
CLTCL1P53675 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.49□□□□□ -1.85
CLTCL1P53675 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.49□□□□□ -1.85
CLTCL1P53675 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CLTCL1P53675 EXOC5P1-201ENST00000510543 1969 ntBASIC3.49□□□□□ -1.85
CLTCL1P53675 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CLTCL1P53675 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.49□□□□□ -1.85
CLTCL1P53675 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLTCL1P53675 AC012078.1-201ENST00000405035 1646 ntBASIC3.48□□□□□ -1.85
CLTCL1P53675 AC019155.1-201ENST00000382242 574 ntBASIC3.48□□□□□ -1.85
CLTCL1P53675 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CLTCL1P53675 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CLTCL1P53675 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.48□□□□□ -1.85
CLTCL1P53675 AL513477.1-202ENST00000417061 214 ntBASIC3.48□□□□□ -1.85
CLTCL1P53675 AL606490.7-201ENST00000433136 191 ntBASIC3.48□□□□□ -1.85
CLTCL1P53675 AL603825.1-201ENST00000438481 80 ntBASIC3.48□□□□□ -1.85
CLTCL1P53675 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.48□□□□□ -1.85
CLTCL1P53675 RPL21P71-201ENST00000465598 459 ntBASIC3.48□□□□□ -1.85
CLTCL1P53675 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLTCL1P53675 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.48□□□□□ -1.85
CLTCL1P53675 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CLTCL1P53675 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.48□□□□□ -1.85
CLTCL1P53675 CKS1BP1-201ENST00000555221 240 ntBASIC3.48□□□□□ -1.85
CLTCL1P53675 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.48□□□□□ -1.85
CLTCL1P53675 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.48□□□□□ -1.85
CLTCL1P53675 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.48□□□□□ -1.85
CLTCL1P53675 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLTCL1P53675 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms