Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.99□□□□□ -1.77
CLCNKAP51800 SDCBPP2-201ENST00000424643 885 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 AL358472.1-201ENST00000431295 329 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.99□□□□□ -1.77
CLCNKAP51800 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.99□□□□□ -1.77
CLCNKAP51800 HLA-N-201ENST00000437516 135 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.99□□□□□ -1.77
CLCNKAP51800 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.99□□□□□ -1.77
CLCNKAP51800 AL162151.2-201ENST00000448875 158 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.99□□□□□ -1.77
CLCNKAP51800 AC073387.1-201ENST00000453261 709 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 FTH1P2-201ENST00000466086 412 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.99□□□□□ -1.77
CLCNKAP51800 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.99□□□□□ -1.77
CLCNKAP51800 PTGES3P3-201ENST00000511479 482 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 AC023141.12-201ENST00000512399 199 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 AC117532.1-201ENST00000514638 323 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.99□□□□□ -1.77
CLCNKAP51800 RNU7-143P-201ENST00000516781 65 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.99□□□□□ -1.77
CLCNKAP51800 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.99□□□□□ -1.77
CLCNKAP51800 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.99□□□□□ -1.77
CLCNKAP51800 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.99□□□□□ -1.77
CLCNKAP51800 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.99□□□□□ -1.77
CLCNKAP51800 RFPL1S-203ENST00000539579 330 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 OR6C73P-201ENST00000546432 358 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.99□□□□□ -1.77
CLCNKAP51800 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.99□□□□□ -1.77
CLCNKAP51800 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.99□□□□□ -1.77
CLCNKAP51800 AC025627.2-201ENST00000576220 160 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 MIR4504-201ENST00000577413 92 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.99□□□□□ -1.77
CLCNKAP51800 AC011260.1-201ENST00000578420 472 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 AC012417.1-201ENST00000582307 1039 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 AC107982.3-201ENST00000584957 985 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 DUXAP11-201ENST00000603858 526 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 AC105129.3-201ENST00000605455 485 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 AL031666.3-201ENST00000609320 1006 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.99□□□□□ -1.77
CLCNKAP51800 AC091965.5-201ENST00000624785 342 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 FAM157B-203ENST00000639350 358 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLCNKAP51800 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLCNKAP51800 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLCNKAP51800 AL445523.1-201ENST00000451184 1362 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.99□□□□□ -1.77
CLCNKAP51800 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.99□□□□□ -1.77
CLCNKAP51800 MTND5P24-201ENST00000438892 1767 ntBASIC3.99□□□□□ -1.77
CLCNKAP51800 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.99□□□□□ -1.77
CLCNKAP51800 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.99□□□□□ -1.77
CLCNKAP51800 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLCNKAP51800 OR5BR1P-201ENST00000524992 1330 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.98□□□□□ -1.77
CLCNKAP51800 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLCNKAP51800 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLCNKAP51800 AC117529.2-201ENST00000512159 2068 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLCNKAP51800 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLCNKAP51800 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CLCNKAP51800 SNRPEP3-201ENST00000338402 276 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 RNA5SP283-201ENST00000365604 119 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLCNKAP51800 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLCNKAP51800 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.98□□□□□ -1.77
CLCNKAP51800 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
CLCNKAP51800 RNU6-1122P-201ENST00000384449 107 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 MIR506-201ENST00000384998 124 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 USP9YP33-201ENST00000412220 421 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.98□□□□□ -1.77
CLCNKAP51800 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.98□□□□□ -1.77
CLCNKAP51800 OR8F1P-201ENST00000425243 930 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 VN1R108P-201ENST00000431580 830 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.98□□□□□ -1.77
CLCNKAP51800 USP9YP35-201ENST00000435696 412 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 MTND2P20-201ENST00000440805 661 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 RPL29P29-201ENST00000448725 423 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 RPL23AP35-201ENST00000451906 501 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.98□□□□□ -1.77
CLCNKAP51800 snoU13.7-201ENST00000459220 104 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 RN7SL585P-201ENST00000470538 280 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 RPL30P6-201ENST00000475925 342 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
CLCNKAP51800 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
CLCNKAP51800 FTH1P21-201ENST00000512179 511 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 RNU6-678P-201ENST00000516832 109 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.98□□□□□ -1.77
CLCNKAP51800 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.98□□□□□ -1.77
CLCNKAP51800 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.98□□□□□ -1.77
CLCNKAP51800 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.98□□□□□ -1.77
CLCNKAP51800 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLCNKAP51800 AC135279.1-201ENST00000543493 504 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.98□□□□□ -1.77
CLCNKAP51800 AC091516.1-201ENST00000549191 703 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 AC107016.1-201ENST00000550463 337 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.98□□□□□ -1.77
CLCNKAP51800 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.98□□□□□ -1.77
CLCNKAP51800 AL389895.1-201ENST00000554127 252 ntBASIC3.98□□□□□ -1.77
CLCNKAP51800 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms