Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AL356585.4-201ENST00000623078 1229 ntBASIC3.45□□□□□ -1.86
CDX1P47902 AP000770.2-201ENST00000623694 100 ntBASIC3.45□□□□□ -1.86
CDX1P47902 AP000676.4-201ENST00000624659 623 ntBASIC3.45□□□□□ -1.86
CDX1P47902 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.45□□□□□ -1.86
CDX1P47902 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CDX1P47902 MTND4P34-201ENST00000572715 1371 ntBASIC3.45□□□□□ -1.86
CDX1P47902 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDX1P47902 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.45□□□□□ -1.86
CDX1P47902 BDP1P-201ENST00000582658 1990 ntBASIC3.45□□□□□ -1.86
CDX1P47902 PRO1804-201ENST00000623780 2050 ntBASIC3.45□□□□□ -1.86
CDX1P47902 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDX1P47902 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.44□□□□□ -1.86
CDX1P47902 MAPK10-372ENST00000641954 3413 ntBASIC3.44□□□□□ -1.86
CDX1P47902 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDX1P47902 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDX1P47902 NXPH1-205ENST00000602349 1953 ntBASIC3.44□□□□□ -1.86
CDX1P47902 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDX1P47902 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDX1P47902 AC126755.2-208ENST00000327792 462 ntBASIC3.44□□□□□ -1.86
CDX1P47902 AC138969.1-213ENST00000331436 462 ntBASIC3.44□□□□□ -1.86
CDX1P47902 RPL32P3-201ENST00000359025 275 ntBASIC3.44□□□□□ -1.86
CDX1P47902 SNORA70.2-201ENST00000364506 135 ntBASIC3.44□□□□□ -1.86
CDX1P47902 HSPE1P26-201ENST00000405341 275 ntBASIC3.44□□□□□ -1.86
CDX1P47902 SNORA11F-201ENST00000408237 128 ntBASIC3.44□□□□□ -1.86
CDX1P47902 SNORA3C-201ENST00000408792 125 ntBASIC3.44□□□□□ -1.86
CDX1P47902 CHIAP3-201ENST00000423668 1133 ntBASIC3.44□□□□□ -1.86
CDX1P47902 MTCYBP45-201ENST00000435243 565 ntBASIC3.44□□□□□ -1.86
CDX1P47902 SNRPEP7-201ENST00000438350 220 ntBASIC3.44□□□□□ -1.86
CDX1P47902 MTCYBP34-201ENST00000439552 670 ntBASIC3.44□□□□□ -1.86
CDX1P47902 UBE2V1P3-201ENST00000439651 417 ntBASIC3.44□□□□□ -1.86
CDX1P47902 CBX1P1-201ENST00000440184 427 ntBASIC3.44□□□□□ -1.86
CDX1P47902 AC114495.1-201ENST00000441274 436 ntBASIC3.44□□□□□ -1.86
CDX1P47902 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.44□□□□□ -1.86
CDX1P47902 AC239367.2-201ENST00000447309 705 ntBASIC3.44□□□□□ -1.86
CDX1P47902 RSL24D1P3-201ENST00000449255 495 ntBASIC3.44□□□□□ -1.86
CDX1P47902 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.44□□□□□ -1.86
CDX1P47902 Z82190.1-201ENST00000454534 490 ntBASIC3.44□□□□□ -1.86
CDX1P47902 USP9YP10-201ENST00000454868 628 ntBASIC3.44□□□□□ -1.86
CDX1P47902 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.44□□□□□ -1.86
CDX1P47902 DHFRP3-201ENST00000455595 559 ntBASIC3.44□□□□□ -1.86
CDX1P47902 RNU7-170P-201ENST00000459303 61 ntBASIC3.44□□□□□ -1.86
CDX1P47902 RPS27AP17-201ENST00000463344 455 ntBASIC3.44□□□□□ -1.86
CDX1P47902 RPL31P50-201ENST00000471002 296 ntBASIC3.44□□□□□ -1.86
CDX1P47902 VN1R17P-201ENST00000472048 1090 ntBASIC3.44□□□□□ -1.86
CDX1P47902 AC026979.1-201ENST00000492525 396 ntBASIC3.44□□□□□ -1.86
CDX1P47902 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDX1P47902 MLLT10P2-201ENST00000506434 249 ntBASIC3.44□□□□□ -1.86
CDX1P47902 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.44□□□□□ -1.86
CDX1P47902 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.44□□□□□ -1.86
CDX1P47902 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.44□□□□□ -1.86
CDX1P47902 PHBP17-201ENST00000528576 541 ntBASIC3.44□□□□□ -1.86
CDX1P47902 AP003461.1-201ENST00000528866 78 ntBASIC3.44□□□□□ -1.86
CDX1P47902 AC018630.1-201ENST00000541376 925 ntBASIC3.44□□□□□ -1.86
CDX1P47902 OR6C7P-201ENST00000547875 934 ntBASIC3.44□□□□□ -1.86
CDX1P47902 CR383656.7-201ENST00000548164 174 ntBASIC3.44□□□□□ -1.86
CDX1P47902 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.44□□□□□ -1.86
CDX1P47902 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.44□□□□□ -1.86
CDX1P47902 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.44□□□□□ -1.86
CDX1P47902 AC136624.4-201ENST00000573044 370 ntBASIC3.44□□□□□ -1.86
CDX1P47902 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.44□□□□□ -1.86
CDX1P47902 MIR3690-201ENST00000580266 75 ntBASIC3.44□□□□□ -1.86
CDX1P47902 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.44□□□□□ -1.86
CDX1P47902 AC113403.1-201ENST00000604910 193 ntBASIC3.44□□□□□ -1.86
CDX1P47902 AL139418.1-201ENST00000613613 177 ntBASIC3.44□□□□□ -1.86
CDX1P47902 AC083809.1-201ENST00000615051 472 ntBASIC3.44□□□□□ -1.86
CDX1P47902 MIR6758-201ENST00000620653 63 ntBASIC3.44□□□□□ -1.86
CDX1P47902 AC103706.2-201ENST00000638080 240 ntBASIC3.44□□□□□ -1.86
CDX1P47902 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.44□□□□□ -1.86
CDX1P47902 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDX1P47902 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDX1P47902 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CDX1P47902 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CDX1P47902 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.44□□□□□ -1.86
CDX1P47902 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CDX1P47902 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CDX1P47902 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDX1P47902 AC066616.2-201ENST00000559334 1481 ntBASIC3.43□□□□□ -1.86
CDX1P47902 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDX1P47902 DDX43P2-201ENST00000604753 1354 ntBASIC3.43□□□□□ -1.86
CDX1P47902 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.43□□□□□ -1.86
CDX1P47902 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.43□□□□□ -1.86
CDX1P47902 NCAPGP1-201ENST00000505112 1814 ntBASIC3.43□□□□□ -1.86
CDX1P47902 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDX1P47902 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDX1P47902 OR5H2-201ENST00000355273 945 ntBASIC3.43□□□□□ -1.86
CDX1P47902 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDX1P47902 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.43□□□□□ -1.86
CDX1P47902 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.43□□□□□ -1.86
CDX1P47902 AL137014.1-201ENST00000420490 1226 ntBASIC3.43□□□□□ -1.86
CDX1P47902 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.43□□□□□ -1.86
CDX1P47902 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.43□□□□□ -1.86
CDX1P47902 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.43□□□□□ -1.86
CDX1P47902 EZH2P1-201ENST00000431167 291 ntBASIC3.43□□□□□ -1.86
CDX1P47902 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.43□□□□□ -1.86
CDX1P47902 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.43□□□□□ -1.86
CDX1P47902 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.43□□□□□ -1.86
CDX1P47902 MTND5P14-201ENST00000441481 1267 ntBASIC3.43□□□□□ -1.86
CDX1P47902 EEF1E1P1-201ENST00000446998 430 ntBASIC3.43□□□□□ -1.86
CDX1P47902 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.43□□□□□ -1.86
CDX1P47902 AL353691.1-201ENST00000451332 387 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms