Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 CEACAMP4-201ENST00000457676 421 ntBASIC3.27□□□□□ -1.89
TNFSF9P41273 RPL23AP62-201ENST00000463396 453 ntBASIC3.27□□□□□ -1.89
TNFSF9P41273 AC080014.1-201ENST00000496877 1201 ntBASIC3.27□□□□□ -1.89
TNFSF9P41273 TRAV31-201ENST00000502780 342 ntBASIC3.27□□□□□ -1.89
TNFSF9P41273 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.27□□□□□ -1.89
TNFSF9P41273 RN7SKP272-201ENST00000516988 232 ntBASIC3.27□□□□□ -1.89
TNFSF9P41273 AC103833.1-201ENST00000517442 172 ntBASIC3.27□□□□□ -1.89
TNFSF9P41273 AP002404.1-201ENST00000532005 451 ntBASIC3.27□□□□□ -1.89
TNFSF9P41273 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.27□□□□□ -1.89
TNFSF9P41273 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.27□□□□□ -1.89
TNFSF9P41273 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.27□□□□□ -1.89
TNFSF9P41273 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.27□□□□□ -1.89
TNFSF9P41273 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.27□□□□□ -1.89
TNFSF9P41273 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
TNFSF9P41273 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.27□□□□□ -1.89
TNFSF9P41273 AC104307.1-201ENST00000616142 196 ntBASIC3.27□□□□□ -1.89
TNFSF9P41273 MIR6852-201ENST00000621699 66 ntBASIC3.27□□□□□ -1.89
TNFSF9P41273 AC048347.1-201ENST00000624621 427 ntBASIC3.27□□□□□ -1.89
TNFSF9P41273 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.27□□□□□ -1.89
TNFSF9P41273 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.27□□□□□ -1.89
TNFSF9P41273 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.27□□□□□ -1.89
TNFSF9P41273 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TNFSF9P41273 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TNFSF9P41273 ENSAP3-201ENST00000312710 333 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 OR5H2-201ENST00000355273 945 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
TNFSF9P41273 U3.6-201ENST00000363622 211 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 RNA5SP27-201ENST00000363839 119 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 RNU6-1243P-201ENST00000364028 107 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 U3.11-201ENST00000364476 212 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TNFSF9P41273 MIR1183-201ENST00000408856 89 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 PNRC2P1-201ENST00000423940 420 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 RPL36P19-201ENST00000430744 301 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 AL513175.1-201ENST00000431492 780 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.26□□□□□ -1.89
TNFSF9P41273 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TNFSF9P41273 NANOGNBP1-201ENST00000448444 480 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.26□□□□□ -1.89
TNFSF9P41273 AC008280.2-201ENST00000455473 307 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 SNRPGP3-201ENST00000469405 227 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 RPS29P26-201ENST00000477483 171 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 AC068724.1-201ENST00000487100 792 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 OR2A20P-203ENST00000498397 1268 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 AC008885.2-201ENST00000509506 930 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 AC010374.2-201ENST00000512933 535 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.26□□□□□ -1.89
TNFSF9P41273 AC113192.3-201ENST00000529152 742 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.26□□□□□ -1.89
TNFSF9P41273 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.26□□□□□ -1.89
TNFSF9P41273 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.26□□□□□ -1.89
TNFSF9P41273 AC008687.2-201ENST00000597865 520 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 U73479.1-201ENST00000618062 168 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.26□□□□□ -1.89
TNFSF9P41273 FRG1DP-201ENST00000635586 771 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
TNFSF9P41273 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
TNFSF9P41273 MTCO1P18-201ENST00000455518 1419 ntBASIC3.26□□□□□ -1.89
TNFSF9P41273 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TNFSF9P41273 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.26□□□□□ -1.89
TNFSF9P41273 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TNFSF9P41273 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TNFSF9P41273 AC011978.2-201ENST00000569835 2054 ntBASIC3.25□□□□□ -1.89
TNFSF9P41273 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
TNFSF9P41273 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TNFSF9P41273 RNU6-600P-201ENST00000362524 99 ntBASIC3.25□□□□□ -1.89
TNFSF9P41273 SNORA51.12-201ENST00000384448 134 ntBASIC3.25□□□□□ -1.89
TNFSF9P41273 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TNFSF9P41273 EIF5P1-201ENST00000400019 1231 ntBASIC3.25□□□□□ -1.89
TNFSF9P41273 HSPE1P26-201ENST00000405341 275 ntBASIC3.25□□□□□ -1.89
TNFSF9P41273 UBE2V1P11-201ENST00000411559 285 ntBASIC3.25□□□□□ -1.89
TNFSF9P41273 HMGB3P31-201ENST00000413333 595 ntBASIC3.25□□□□□ -1.89
TNFSF9P41273 MTND2P16-201ENST00000419987 799 ntBASIC3.25□□□□□ -1.89
TNFSF9P41273 AC244098.2-201ENST00000422068 99 ntBASIC3.25□□□□□ -1.89
TNFSF9P41273 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFSF9P41273 RPL21P112-201ENST00000434403 463 ntBASIC3.25□□□□□ -1.89
TNFSF9P41273 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.25□□□□□ -1.89
TNFSF9P41273 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
TNFSF9P41273 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.25□□□□□ -1.89
TNFSF9P41273 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.25□□□□□ -1.89
TNFSF9P41273 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFSF9P41273 IGKV2D-23-201ENST00000518179 286 ntBASIC3.25□□□□□ -1.89
TNFSF9P41273 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFSF9P41273 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.25□□□□□ -1.89
TNFSF9P41273 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TNFSF9P41273 AC091515.1-201ENST00000548110 679 ntBASIC3.25□□□□□ -1.89
TNFSF9P41273 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFSF9P41273 AC090616.5-202ENST00000582111 297 ntBASIC3.25□□□□□ -1.89
TNFSF9P41273 SNRPGP15-201ENST00000600149 222 ntBASIC3.25□□□□□ -1.89
TNFSF9P41273 AL450270.1-201ENST00000606160 391 ntBASIC3.25□□□□□ -1.89
TNFSF9P41273 AC103710.3-201ENST00000608157 948 ntBASIC3.25□□□□□ -1.89
TNFSF9P41273 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
TNFSF9P41273 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
TNFSF9P41273 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TNFSF9P41273 AC046144.1-201ENST00000478559 1853 ntBASIC3.24□□□□□ -1.89
TNFSF9P41273 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.24□□□□□ -1.89
TNFSF9P41273 RNU1-140P-201ENST00000365040 165 ntBASIC3.24□□□□□ -1.89
TNFSF9P41273 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.24□□□□□ -1.89
TNFSF9P41273 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms