Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 COX7BP2-201ENST00000437976 242 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.17□□□□□ -1.74
HOXA13P31271 MTCYBP11-201ENST00000447254 1109 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 PDSS1P2-201ENST00000449397 678 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 NDUFS5P3-201ENST00000450668 321 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 RPL12P26-201ENST00000452430 487 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 TRBV26-201ENST00000456572 344 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA13P31271 RPL7L1P8-201ENST00000469911 741 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 RPL21P103-201ENST00000479921 488 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA13P31271 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA13P31271 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.17□□□□□ -1.74
HOXA13P31271 AC109445.1-201ENST00000512356 383 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 HIGD1AP3-201ENST00000515857 278 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA13P31271 OR4A45P-201ENST00000529954 901 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA13P31271 OR8L1P-201ENST00000534005 955 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA13P31271 AC010198.2-201ENST00000550612 259 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.17□□□□□ -1.74
HOXA13P31271 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA13P31271 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA13P31271 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA13P31271 OR4G1P-201ENST00000588632 938 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 AC245036.5-201ENST00000596330 847 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 AC008751.2-201ENST00000597885 980 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 AC010591.1-201ENST00000603941 649 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 AC231759.1-201ENST00000616455 597 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 AL158196.1-201ENST00000616786 434 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA13P31271 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA13P31271 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HOXA13P31271 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA13P31271 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA13P31271 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA13P31271 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA13P31271 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
HOXA13P31271 Y_RNA.408-201ENST00000383987 102 ntBASIC4.16□□□□□ -1.74
HOXA13P31271 RNA5SP104-201ENST00000410989 118 ntBASIC4.16□□□□□ -1.74
HOXA13P31271 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.16□□□□□ -1.74
HOXA13P31271 HMGB3P20-201ENST00000417997 600 ntBASIC4.16□□□□□ -1.74
HOXA13P31271 RPL31P45-201ENST00000419532 356 ntBASIC4.16□□□□□ -1.74
HOXA13P31271 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA13P31271 AL035410.1-201ENST00000427409 427 ntBASIC4.16□□□□□ -1.74
HOXA13P31271 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA13P31271 MTATP6P26-201ENST00000445926 662 ntBASIC4.16□□□□□ -1.74
HOXA13P31271 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA13P31271 RPL21P134-201ENST00000453468 483 ntBASIC4.16□□□□□ -1.74
HOXA13P31271 AL136126.1-201ENST00000473603 402 ntBASIC4.16□□□□□ -1.74
HOXA13P31271 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA13P31271 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA13P31271 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA13P31271 MTCYBP37-201ENST00000510642 1133 ntBASIC4.16□□□□□ -1.74
HOXA13P31271 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.16□□□□□ -1.74
HOXA13P31271 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.16□□□□□ -1.74
HOXA13P31271 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA13P31271 OR5B10P-201ENST00000532869 642 ntBASIC4.16□□□□□ -1.74
HOXA13P31271 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA13P31271 SULT1C2P1-202ENST00000562418 459 ntBASIC4.16□□□□□ -1.74
HOXA13P31271 AC009097.3-201ENST00000563557 1018 ntBASIC4.16□□□□□ -1.74
HOXA13P31271 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
HOXA13P31271 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA13P31271 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA13P31271 AL139395.1-201ENST00000603662 160 ntBASIC4.16□□□□□ -1.74
HOXA13P31271 ELOCP35-201ENST00000604289 336 ntBASIC4.16□□□□□ -1.74
HOXA13P31271 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA13P31271 AC080013.3-201ENST00000606839 578 ntBASIC4.16□□□□□ -1.74
HOXA13P31271 AL159169.3-201ENST00000608871 561 ntBASIC4.16□□□□□ -1.74
HOXA13P31271 AP001521.1-201ENST00000609150 300 ntBASIC4.16□□□□□ -1.74
HOXA13P31271 AC092106.3-201ENST00000611308 722 ntBASIC4.16□□□□□ -1.74
HOXA13P31271 AL391261.4-201ENST00000616012 481 ntBASIC4.16□□□□□ -1.74
HOXA13P31271 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA13P31271 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA13P31271 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
HOXA13P31271 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA13P31271 MTND4P26-201ENST00000415971 1359 ntBASIC4.15□□□□□ -1.74
HOXA13P31271 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
HOXA13P31271 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.15□□□□□ -1.74
HOXA13P31271 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.15□□□□□ -1.74
HOXA13P31271 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.15□□□□□ -1.74
HOXA13P31271 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.15□□□□□ -1.74
HOXA13P31271 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
HOXA13P31271 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.15□□□□□ -1.74
HOXA13P31271 AC007656.2-201ENST00000624902 4547 ntBASIC4.15□□□□□ -1.75
HOXA13P31271 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXA13P31271 MIR208A-201ENST00000362287 71 ntBASIC4.15□□□□□ -1.75
HOXA13P31271 RNU6-374P-201ENST00000364146 108 ntBASIC4.15□□□□□ -1.75
HOXA13P31271 RNU6-356P-201ENST00000384140 107 ntBASIC4.15□□□□□ -1.75
HOXA13P31271 AL160275.2-201ENST00000412010 394 ntBASIC4.15□□□□□ -1.75
HOXA13P31271 LUZP4P1-201ENST00000415420 344 ntBASIC4.15□□□□□ -1.75
HOXA13P31271 AL008987.1-201ENST00000415528 237 ntBASIC4.15□□□□□ -1.75
HOXA13P31271 AC245052.5-201ENST00000416320 649 ntBASIC4.15□□□□□ -1.75
HOXA13P31271 ELOCP9-201ENST00000418624 239 ntBASIC4.15□□□□□ -1.75
HOXA13P31271 AC004552.1-201ENST00000419089 348 ntBASIC4.15□□□□□ -1.75
HOXA13P31271 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXA13P31271 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXA13P31271 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXA13P31271 NANOGP6-201ENST00000429190 847 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms