Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 snoU109.4-201ENST00000458953 143 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 MTCO2P29-201ENST00000465212 189 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 AC006463.2-201ENST00000473326 348 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 RPS24P16-201ENST00000497294 392 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.95□□□□□ -1.46
ERCC3P19447 ENPP7P11-201ENST00000505915 627 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 OR51K1P-201ENST00000510214 950 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.95□□□□□ -1.46
ERCC3P19447 BTF3P13-201ENST00000513224 490 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 HMGN1P9-201ENST00000515212 298 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 AC021006.3-201ENST00000530771 192 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.95□□□□□ -1.46
ERCC3P19447 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.95□□□□□ -1.46
ERCC3P19447 BNIP3P1-201ENST00000547295 580 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.95□□□□□ -1.46
ERCC3P19447 AC098848.2-201ENST00000588023 330 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 AC008814.1-201ENST00000603797 406 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 AC008966.2-201ENST00000606157 453 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 MIR6810-201ENST00000622701 70 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 AC011755.1-201ENST00000623763 2049 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 AC074029.4-201ENST00000624796 1859 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ERCC3P19447 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ERCC3P19447 AC112198.2-201ENST00000426589 6996 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ERCC3P19447 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.95□□□□□ -1.46
ERCC3P19447 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
ERCC3P19447 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
ERCC3P19447 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ERCC3P19447 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
ERCC3P19447 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.94□□□□□ -1.46
ERCC3P19447 MTCO1P24-201ENST00000515438 1558 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
ERCC3P19447 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ERCC3P19447 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
ERCC3P19447 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
ERCC3P19447 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ERCC3P19447 RNU6-432P-201ENST00000384196 109 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 Y_RNA.481-201ENST00000384373 102 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 RNU6-876P-201ENST00000391295 104 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 CTSL3P-202ENST00000412179 788 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 JKAMPP1-201ENST00000413804 919 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.94□□□□□ -1.46
ERCC3P19447 AL139413.1-201ENST00000421309 217 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC3P19447 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC3P19447 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.94□□□□□ -1.46
ERCC3P19447 NEK4P1-201ENST00000433383 879 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC3P19447 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.94□□□□□ -1.46
ERCC3P19447 AC012512.1-201ENST00000446594 718 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 RPS17P13-201ENST00000448974 407 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 AC140076.1-201ENST00000449897 361 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC3P19447 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC3P19447 AC009963.2-201ENST00000453431 138 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 RN7SL738P-201ENST00000470264 297 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 RPL21P103-201ENST00000479921 488 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.94□□□□□ -1.46
ERCC3P19447 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.94□□□□□ -1.46
ERCC3P19447 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC3P19447 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC3P19447 AP003034.1-201ENST00000534621 422 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.94□□□□□ -1.46
ERCC3P19447 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.94□□□□□ -1.46
ERCC3P19447 AL121579.1-201ENST00000555129 305 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.94□□□□□ -1.46
ERCC3P19447 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.94□□□□□ -1.46
ERCC3P19447 AL031320.1-201ENST00000604177 357 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 TUG1_1.1-201ENST00000610654 145 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ERCC3P19447 uc_338.12-201ENST00000616344 181 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 AC009161.2-201ENST00000624626 138 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 MIR6715B-201ENST00000637172 77 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 AC099654.14-201ENST00000638599 341 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
ERCC3P19447 NMD3P1-201ENST00000439704 1488 ntBASIC5.94□□□□□ -1.46
ERCC3P19447 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.94□□□□□ -1.46
ERCC3P19447 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
ERCC3P19447 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
ERCC3P19447 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.94□□□□□ -1.46
ERCC3P19447 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
ERCC3P19447 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.94□□□□□ -1.46
ERCC3P19447 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
ERCC3P19447 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ERCC3P19447 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.93□□□□□ -1.46
ERCC3P19447 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
ERCC3P19447 Y_RNA.89-201ENST00000363031 102 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 RNU6-1249P-201ENST00000363237 111 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 RNA5SP428-201ENST00000365129 132 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 RNU6-169P-201ENST00000365336 107 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 MIR141-201ENST00000384975 95 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 AL603766.1-201ENST00000407763 664 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.93□□□□□ -1.46
ERCC3P19447 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.93□□□□□ -1.46
ERCC3P19447 OR1AA1P-201ENST00000419597 916 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 AL353193.1-201ENST00000421444 268 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.93□□□□□ -1.46
ERCC3P19447 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms