Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 DPRXP5-201ENST00000604662 539 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 AC245389.1-201ENST00000605141 529 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 AL391261.4-201ENST00000616012 481 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 AC006133.1-201ENST00000617106 264 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 AC073348.1-201ENST00000623002 331 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 CR381572.1-201ENST00000625098 102 ntBASIC3.89□□□□□ -1.79
PDGFRAP16234 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFRAP16234 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PDGFRAP16234 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PDGFRAP16234 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.89□□□□□ -1.79
PDGFRAP16234 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFRAP16234 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDGFRAP16234 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.88□□□□□ -1.79
PDGFRAP16234 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.88□□□□□ -1.79
PDGFRAP16234 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PDGFRAP16234 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDGFRAP16234 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PDGFRAP16234 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PDGFRAP16234 RNU1-18P-201ENST00000363062 164 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PDGFRAP16234 RNU6-657P-201ENST00000383904 107 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 RNU6-761P-201ENST00000384148 107 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 ATP5F1P3-201ENST00000397213 657 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 AL136310.1-201ENST00000404926 654 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 MTATP6P20-201ENST00000414147 562 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 AC007390.1-201ENST00000415722 356 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 EI24P1-201ENST00000416584 867 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 MRPS36P1-201ENST00000421291 307 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.88□□□□□ -1.79
PDGFRAP16234 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.88□□□□□ -1.79
PDGFRAP16234 NANOGP2-201ENST00000435391 727 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.88□□□□□ -1.79
PDGFRAP16234 AC127537.2-201ENST00000439258 465 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 AC004854.1-201ENST00000440356 349 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 AL133547.1-201ENST00000448546 220 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PDGFRAP16234 RFC5P1-201ENST00000454419 874 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 MTCO3P20-201ENST00000454926 688 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.88□□□□□ -1.79
PDGFRAP16234 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.88□□□□□ -1.79
PDGFRAP16234 AC108734.3-201ENST00000481241 1165 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.88□□□□□ -1.79
PDGFRAP16234 AC108078.3-201ENST00000502633 489 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 RN7SKP83-201ENST00000516512 178 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 SNORA67.7-201ENST00000516664 135 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 TRMT10BP1-201ENST00000519377 943 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 AC007991.1-201ENST00000522680 631 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.88□□□□□ -1.79
PDGFRAP16234 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.88□□□□□ -1.79
PDGFRAP16234 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.88□□□□□ -1.79
PDGFRAP16234 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.88□□□□□ -1.79
PDGFRAP16234 AC008011.1-201ENST00000545989 227 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
PDGFRAP16234 MIR3158-1-201ENST00000583596 81 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.88□□□□□ -1.79
PDGFRAP16234 AC021749.1-201ENST00000604322 607 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 RNU1-30P-201ENST00000606575 163 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.88□□□□□ -1.79
PDGFRAP16234 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.88□□□□□ -1.79
PDGFRAP16234 AP001521.1-201ENST00000609150 300 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 AC016597.2-201ENST00000613256 341 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 AC231759.1-201ENST00000616455 597 ntBASIC3.88□□□□□ -1.79
PDGFRAP16234 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.88□□□□□ -1.79
PDGFRAP16234 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PDGFRAP16234 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.88□□□□□ -1.79
PDGFRAP16234 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.88□□□□□ -1.79
PDGFRAP16234 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.88□□□□□ -1.79
PDGFRAP16234 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDGFRAP16234 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.88□□□□□ -1.79
PDGFRAP16234 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDGFRAP16234 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
PDGFRAP16234 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDGFRAP16234 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
PDGFRAP16234 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDGFRAP16234 Y_RNA.25-201ENST00000362528 102 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 SNORD3H-201ENST00000384486 214 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 MIR607-201ENST00000385241 96 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 RNU6-837P-201ENST00000391056 108 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.87□□□□□ -1.79
PDGFRAP16234 MTHFD2P2-201ENST00000407725 247 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.87□□□□□ -1.79
PDGFRAP16234 RAB9AP3-201ENST00000412737 573 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 HMGB3P20-201ENST00000417997 600 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.87□□□□□ -1.79
PDGFRAP16234 GTF2IP23-201ENST00000423746 351 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.87□□□□□ -1.79
PDGFRAP16234 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.87□□□□□ -1.79
PDGFRAP16234 NDUFB1P1-201ENST00000435191 180 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 AL589880.1-201ENST00000448271 287 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 RAB9AP1-201ENST00000449393 573 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.87□□□□□ -1.79
PDGFRAP16234 RPL5P24-201ENST00000463742 885 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 AL049830.2-201ENST00000480072 201 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 AC093767.1-201ENST00000504523 156 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 RNU6-1225P-201ENST00000516336 65 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.87□□□□□ -1.79
PDGFRAP16234 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.87□□□□□ -1.79
PDGFRAP16234 AC008127.2-201ENST00000549925 1075 ntBASIC3.87□□□□□ -1.79
PDGFRAP16234 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms