Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RNU6-178P-201ENST00000384631 104 ntBASIC2.88□□□□□ -1.95
COL11A1P12107 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.88□□□□□ -1.95
COL11A1P12107 AC009969.1-201ENST00000438726 172 ntBASIC2.88□□□□□ -1.95
COL11A1P12107 AL035551.1-201ENST00000446931 348 ntBASIC2.88□□□□□ -1.95
COL11A1P12107 TRBV8-1-201ENST00000481590 279 ntBASIC2.88□□□□□ -1.95
COL11A1P12107 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.88□□□□□ -1.95
COL11A1P12107 PDCD5P1-201ENST00000543528 309 ntBASIC2.88□□□□□ -1.95
COL11A1P12107 AL158827.2-201ENST00000602494 330 ntBASIC2.88□□□□□ -1.95
COL11A1P12107 AC004825.2-201ENST00000616634 455 ntBASIC2.88□□□□□ -1.95
COL11A1P12107 AC009159.1-201ENST00000618386 642 ntBASIC2.88□□□□□ -1.95
COL11A1P12107 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.88□□□□□ -1.95
COL11A1P12107 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.88□□□□□ -1.95
COL11A1P12107 AL691447.3-201ENST00000635020 330 ntBASIC2.88□□□□□ -1.95
COL11A1P12107 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
COL11A1P12107 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL11A1P12107 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL11A1P12107 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL11A1P12107 AC009313.2-201ENST00000417893 1941 ntBASIC2.87□□□□□ -1.95
COL11A1P12107 AC069528.2-201ENST00000624849 1991 ntBASIC2.87□□□□□ -1.95
COL11A1P12107 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL11A1P12107 SNORA36C-201ENST00000384289 132 ntBASIC2.87□□□□□ -1.95
COL11A1P12107 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.87□□□□□ -1.95
COL11A1P12107 MTND4LP21-201ENST00000415303 295 ntBASIC2.87□□□□□ -1.95
COL11A1P12107 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.87□□□□□ -1.95
COL11A1P12107 AL662791.1-201ENST00000441992 928 ntBASIC2.87□□□□□ -1.95
COL11A1P12107 AL592437.1-201ENST00000443781 492 ntBASIC2.87□□□□□ -1.95
COL11A1P12107 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.87□□□□□ -1.95
COL11A1P12107 VTA1P2-201ENST00000520205 911 ntBASIC2.87□□□□□ -1.95
COL11A1P12107 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.87□□□□□ -1.95
COL11A1P12107 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.87□□□□□ -1.95
COL11A1P12107 NPM1P35-201ENST00000533043 868 ntBASIC2.87□□□□□ -1.95
COL11A1P12107 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.87□□□□□ -1.95
COL11A1P12107 AC010620.2-201ENST00000600135 313 ntBASIC2.87□□□□□ -1.95
COL11A1P12107 AC016252.1-201ENST00000609721 474 ntBASIC2.87□□□□□ -1.95
COL11A1P12107 AC004241.3-201ENST00000611728 517 ntBASIC2.87□□□□□ -1.95
COL11A1P12107 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL11A1P12107 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.87□□□□□ -1.95
COL11A1P12107 GTF2H2B-203ENST00000508065 1432 ntBASIC2.87□□□□□ -1.95
COL11A1P12107 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL11A1P12107 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL11A1P12107 AL137014.1-201ENST00000420490 1226 ntBASIC2.86□□□□□ -1.95
COL11A1P12107 AC244033.1-201ENST00000426826 870 ntBASIC2.86□□□□□ -1.95
COL11A1P12107 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.86□□□□□ -1.95
COL11A1P12107 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.86□□□□□ -1.95
COL11A1P12107 MRPL50P4-201ENST00000446432 475 ntBASIC2.86□□□□□ -1.95
COL11A1P12107 AC068305.1-201ENST00000497406 726 ntBASIC2.86□□□□□ -1.95
COL11A1P12107 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.86□□□□□ -1.95
COL11A1P12107 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.86□□□□□ -1.95
COL11A1P12107 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.86□□□□□ -1.95
COL11A1P12107 AC090312.2-201ENST00000582687 378 ntBASIC2.86□□□□□ -1.95
COL11A1P12107 LRRC77P-213ENST00000637727 880 ntBASIC2.86□□□□□ -1.95
COL11A1P12107 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL11A1P12107 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL11A1P12107 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL11A1P12107 AC134882.1-201ENST00000603738 1676 ntBASIC2.86□□□□□ -1.95
COL11A1P12107 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.86□□□□□ -1.95
COL11A1P12107 Z73965.1-201ENST00000623412 2297 ntBASIC2.86□□□□□ -1.95
COL11A1P12107 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.86□□□□□ -1.95
COL11A1P12107 EI24P2-201ENST00000397776 1076 ntBASIC2.86□□□□□ -1.95
COL11A1P12107 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC2.86□□□□□ -1.95
COL11A1P12107 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.86□□□□□ -1.95
COL11A1P12107 AC009302.1-201ENST00000417147 390 ntBASIC2.86□□□□□ -1.95
COL11A1P12107 VN1R31P-201ENST00000417498 730 ntBASIC2.86□□□□□ -1.95
COL11A1P12107 AC233981.1-201ENST00000423224 461 ntBASIC2.86□□□□□ -1.95
COL11A1P12107 AC012498.1-201ENST00000424037 437 ntBASIC2.86□□□□□ -1.95
COL11A1P12107 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.86□□□□□ -1.95
COL11A1P12107 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.86□□□□□ -1.95
COL11A1P12107 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.86□□□□□ -1.95
COL11A1P12107 Y_RNA.673-201ENST00000516306 88 ntBASIC2.86□□□□□ -1.95
COL11A1P12107 AC025423.2-201ENST00000537570 439 ntBASIC2.86□□□□□ -1.95
COL11A1P12107 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.86□□□□□ -1.95
COL11A1P12107 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.86□□□□□ -1.95
COL11A1P12107 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.86□□□□□ -1.95
COL11A1P12107 RPL9P7-201ENST00000330965 580 ntBASIC2.85□□□□□ -1.95
COL11A1P12107 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
COL11A1P12107 ATF1P1-201ENST00000406040 927 ntBASIC2.85□□□□□ -1.95
COL11A1P12107 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.85□□□□□ -1.95
COL11A1P12107 RPL7P10-201ENST00000417407 739 ntBASIC2.85□□□□□ -1.95
COL11A1P12107 HMGN2P3-201ENST00000433603 273 ntBASIC2.85□□□□□ -1.95
COL11A1P12107 UBE2D3P1-201ENST00000436669 444 ntBASIC2.85□□□□□ -1.95
COL11A1P12107 HMGN2P5-201ENST00000436882 273 ntBASIC2.85□□□□□ -1.95
COL11A1P12107 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.85□□□□□ -1.95
COL11A1P12107 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.85□□□□□ -1.95
COL11A1P12107 HSPE1P22-201ENST00000456856 327 ntBASIC2.85□□□□□ -1.95
COL11A1P12107 DEFB122-202ENST00000569013 197 ntBASIC2.85□□□□□ -1.95
COL11A1P12107 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.85□□□□□ -1.95
COL11A1P12107 AC004925.1-201ENST00000624256 2706 ntBASIC2.85□□□□□ -1.95
COL11A1P12107 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.85□□□□□ -1.95
COL11A1P12107 XPOTP1-201ENST00000443317 2398 ntBASIC2.85□□□□□ -1.95
COL11A1P12107 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.85□□□□□ -1.95
COL11A1P12107 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL11A1P12107 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL11A1P12107 FAM133CP-201ENST00000332869 704 ntBASIC2.84□□□□□ -1.95
COL11A1P12107 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
COL11A1P12107 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.84□□□□□ -1.95
COL11A1P12107 AC093151.1-201ENST00000427711 313 ntBASIC2.84□□□□□ -1.95
COL11A1P12107 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.84□□□□□ -1.95
COL11A1P12107 RN7SL283P-201ENST00000489055 303 ntBASIC2.84□□□□□ -1.95
COL11A1P12107 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2.84□□□□□ -1.95
COL11A1P12107 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms