Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MMP3P08254 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
MMP3P08254 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.28□□□□□ -1.72
MMP3P08254 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
MMP3P08254 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.73
MMP3P08254 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MMP3P08254 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
MMP3P08254 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
MMP3P08254 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
MMP3P08254 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.27□□□□□ -1.73
MMP3P08254 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MMP3P08254 AC009229.4-201ENST00000623854 1947 ntBASIC4.27□□□□□ -1.73
MMP3P08254 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.27□□□□□ -1.73
MMP3P08254 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.27□□□□□ -1.73
MMP3P08254 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
MMP3P08254 CR381670.1-201ENST00000624291 1693 ntBASIC4.27□□□□□ -1.73
MMP3P08254 CDR1-202ENST00000625883 1485 ntBASIC4.27□□□□□ -1.73
MMP3P08254 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MMP3P08254 Y_RNA.25-201ENST00000362528 102 ntBASIC4.27□□□□□ -1.73
MMP3P08254 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MMP3P08254 RNU6-1293P-201ENST00000384077 107 ntBASIC4.27□□□□□ -1.73
MMP3P08254 RPL23AP29-201ENST00000397284 453 ntBASIC4.27□□□□□ -1.73
MMP3P08254 AL450338.1-201ENST00000407987 512 ntBASIC4.27□□□□□ -1.73
MMP3P08254 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.27□□□□□ -1.73
MMP3P08254 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.27□□□□□ -1.73
MMP3P08254 AL589823.1-201ENST00000429577 183 ntBASIC4.27□□□□□ -1.73
MMP3P08254 MTCO2P16-201ENST00000436962 677 ntBASIC4.27□□□□□ -1.73
MMP3P08254 RPS3AP12-201ENST00000443616 753 ntBASIC4.27□□□□□ -1.73
MMP3P08254 UBDP1-202ENST00000457888 382 ntBASIC4.27□□□□□ -1.73
MMP3P08254 RPL7P38-201ENST00000488396 739 ntBASIC4.27□□□□□ -1.73
MMP3P08254 ARL4AP1-201ENST00000503220 705 ntBASIC4.27□□□□□ -1.73
MMP3P08254 MTCYBP17-201ENST00000503579 789 ntBASIC4.27□□□□□ -1.73
MMP3P08254 DSTNP2-201ENST00000504533 515 ntBASIC4.27□□□□□ -1.73
MMP3P08254 AC025554.1-201ENST00000505641 188 ntBASIC4.27□□□□□ -1.73
MMP3P08254 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.27□□□□□ -1.73
MMP3P08254 HMGB1P28-201ENST00000507778 552 ntBASIC4.27□□□□□ -1.73
MMP3P08254 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.27□□□□□ -1.73
MMP3P08254 RNA5SP164-201ENST00000516533 110 ntBASIC4.27□□□□□ -1.73
MMP3P08254 RN7SKP96-201ENST00000516948 297 ntBASIC4.27□□□□□ -1.73
MMP3P08254 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.27□□□□□ -1.73
MMP3P08254 OR5AK1P-201ENST00000524837 922 ntBASIC4.27□□□□□ -1.73
MMP3P08254 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.27□□□□□ -1.73
MMP3P08254 SLC2A13P1-201ENST00000531560 322 ntBASIC4.27□□□□□ -1.73
MMP3P08254 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MMP3P08254 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.27□□□□□ -1.73
MMP3P08254 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
MMP3P08254 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.27□□□□□ -1.73
MMP3P08254 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.27□□□□□ -1.73
MMP3P08254 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.27□□□□□ -1.73
MMP3P08254 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
MMP3P08254 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.27□□□□□ -1.73
MMP3P08254 AC018552.3-201ENST00000567416 561 ntBASIC4.27□□□□□ -1.73
MMP3P08254 AL121834.1-201ENST00000572284 509 ntBASIC4.27□□□□□ -1.73
MMP3P08254 NBR2-204ENST00000587322 63 ntBASIC4.27□□□□□ -1.73
MMP3P08254 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.27□□□□□ -1.73
MMP3P08254 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.27□□□□□ -1.73
MMP3P08254 AC091946.2-201ENST00000606105 291 ntBASIC4.27□□□□□ -1.73
MMP3P08254 AC073114.1-201ENST00000612027 490 ntBASIC4.27□□□□□ -1.73
MMP3P08254 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.27□□□□□ -1.73
MMP3P08254 AC015967.1-201ENST00000619893 476 ntBASIC4.27□□□□□ -1.73
MMP3P08254 RNU6-156P-201ENST00000621869 107 ntBASIC4.27□□□□□ -1.73
MMP3P08254 AC120349.2-201ENST00000625002 298 ntBASIC4.27□□□□□ -1.73
MMP3P08254 AC092192.1-201ENST00000633154 1018 ntBASIC4.27□□□□□ -1.73
MMP3P08254 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
MMP3P08254 LINC00561-201ENST00000565815 2738 ntBASIC4.27□□□□□ -1.73
MMP3P08254 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MMP3P08254 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MMP3P08254 AC007390.2-201ENST00000606229 3803 ntBASIC4.27□□□□□ -1.73
MMP3P08254 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
MMP3P08254 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.26□□□□□ -1.73
MMP3P08254 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MMP3P08254 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.26□□□□□ -1.73
MMP3P08254 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.26□□□□□ -1.73
MMP3P08254 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MMP3P08254 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
MMP3P08254 RNA5SP51-201ENST00000364750 119 ntBASIC4.26□□□□□ -1.73
MMP3P08254 SNORA9-201ENST00000384215 133 ntBASIC4.26□□□□□ -1.73
MMP3P08254 DSTNP4-201ENST00000399472 474 ntBASIC4.26□□□□□ -1.73
MMP3P08254 MIR1284-201ENST00000408337 120 ntBASIC4.26□□□□□ -1.73
MMP3P08254 RNU6-920P-201ENST00000410926 92 ntBASIC4.26□□□□□ -1.73
MMP3P08254 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.26□□□□□ -1.73
MMP3P08254 RPS29P4-201ENST00000414733 161 ntBASIC4.26□□□□□ -1.73
MMP3P08254 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.26□□□□□ -1.73
MMP3P08254 MORF4L1P6-201ENST00000418771 268 ntBASIC4.26□□□□□ -1.73
MMP3P08254 AC233981.1-201ENST00000423224 461 ntBASIC4.26□□□□□ -1.73
MMP3P08254 AC019178.2-201ENST00000423595 505 ntBASIC4.26□□□□□ -1.73
MMP3P08254 AL031736.2-201ENST00000426573 787 ntBASIC4.26□□□□□ -1.73
MMP3P08254 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.26□□□□□ -1.73
MMP3P08254 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.26□□□□□ -1.73
MMP3P08254 RPS17P13-201ENST00000448974 407 ntBASIC4.26□□□□□ -1.73
MMP3P08254 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.26□□□□□ -1.73
MMP3P08254 AC013828.1-201ENST00000481845 158 ntBASIC4.26□□□□□ -1.73
MMP3P08254 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.26□□□□□ -1.73
MMP3P08254 AC106707.2-201ENST00000484182 374 ntBASIC4.26□□□□□ -1.73
MMP3P08254 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.26□□□□□ -1.73
MMP3P08254 RPL30P11-201ENST00000495304 339 ntBASIC4.26□□□□□ -1.73
MMP3P08254 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.26□□□□□ -1.73
MMP3P08254 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.26□□□□□ -1.73
MMP3P08254 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.26□□□□□ -1.73
MMP3P08254 RNU6-488P-201ENST00000515918 99 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms