Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DOAP06340 ELF2P3-201ENST00000445099 1506 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DOAP06340 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DOAP06340 AC016716.1-201ENST00000265882 708 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DOAP06340 SUGT1P1-201ENST00000379514 476 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 AL450338.1-201ENST00000407987 512 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 RN7SKP202-201ENST00000410439 330 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DOAP06340 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DOAP06340 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 B3GNT2P1-201ENST00000434960 952 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DOAP06340 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 RPS4XP4-201ENST00000443195 763 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 NF1P3-201ENST00000457709 450 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 AC079804.1-201ENST00000461922 436 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 AP000797.1-201ENST00000478870 387 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 RPL9P6-201ENST00000492764 598 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 RPL29P14-201ENST00000495837 428 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 AC108941.1-201ENST00000502853 530 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 AC116347.2-201ENST00000514912 523 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 RN7SKP298-201ENST00000515950 94 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 RNU6-314P-201ENST00000516574 104 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 SNORA48.10-201ENST00000516965 160 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 IFITM8P-201ENST00000522529 394 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 AC087276.1-201ENST00000529659 480 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 OR4A45P-201ENST00000529954 901 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 CBX3P7-201ENST00000532876 502 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 AP002453.2-201ENST00000533503 320 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 HMGN2P47-201ENST00000559378 272 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 AC034105.4-201ENST00000568304 277 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 MIR3913-1-201ENST00000577744 102 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 MIR5684-201ENST00000585074 65 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 AC005771.1-201ENST00000585581 349 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DOAP06340 AC006363.1-201ENST00000603806 463 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 AC091488.1-201ENST00000604239 660 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 MIR6500-201ENST00000622700 86 ntBASIC4.88□□□□□ -1.63
HLA-DOAP06340 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DOAP06340 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DOAP06340 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 RNU1-15P-201ENST00000353977 144 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DOAP06340 SNORA48.7-201ENST00000391302 135 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 RPL17P50-201ENST00000396131 546 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 HSPD1P16-201ENST00000402302 394 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 AC002524.1-201ENST00000411687 547 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 RPS23P10-201ENST00000416185 486 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 OFD1P18Y-201ENST00000420889 959 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 AL691449.1-201ENST00000426570 421 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 VN1R34P-201ENST00000447387 883 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 NDUFA5P7-201ENST00000452914 242 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 UBA52P3-201ENST00000491303 382 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 AC005912.1-201ENST00000495392 255 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 RNU6-1261P-201ENST00000517194 104 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 OR4R3P-201ENST00000525084 838 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 RN7SL703P-201ENST00000578485 302 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 AL354760.1-201ENST00000608357 643 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 AC017083.3-201ENST00000609955 700 ntBASIC4.87□□□□□ -1.63
HLA-DOAP06340 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DOAP06340 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms