Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.44□□□□□ -1.86
MT-ND1P03886 ELOCP9-201ENST00000418624 239 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
MT-ND1P03886 MTCO1P3-201ENST00000429327 192 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 AL158071.1-201ENST00000430315 461 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 MTATP6P17-201ENST00000431030 672 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.44□□□□□ -1.86
MT-ND1P03886 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.44□□□□□ -1.86
MT-ND1P03886 AC093155.1-201ENST00000440164 826 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 MTND1P26-201ENST00000440488 538 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 AC114755.5-201ENST00000447760 831 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 AC006480.1-201ENST00000449887 378 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
MT-ND1P03886 AC104073.1-201ENST00000451988 151 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.44□□□□□ -1.86
MT-ND1P03886 RPL23AP62-201ENST00000463396 453 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 AC022034.3-201ENST00000471393 478 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.44□□□□□ -1.86
MT-ND1P03886 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.44□□□□□ -1.86
MT-ND1P03886 OR5H5P-201ENST00000503164 928 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 AC098862.1-201ENST00000504991 413 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 AC008837.2-201ENST00000513076 418 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 RNA5SP315-201ENST00000516340 116 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 RNA5SP312-201ENST00000517068 116 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.44□□□□□ -1.86
MT-ND1P03886 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.44□□□□□ -1.86
MT-ND1P03886 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.44□□□□□ -1.86
MT-ND1P03886 AC023161.2-201ENST00000551218 780 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.44□□□□□ -1.86
MT-ND1P03886 AC006960.3-201ENST00000561845 705 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 AC103881.1-201ENST00000603476 538 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 AL590282.1-201ENST00000610379 1136 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 AC090116.1-201ENST00000615679 446 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.44□□□□□ -1.86
MT-ND1P03886 AC006338.2-201ENST00000616864 791 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 AP000676.4-201ENST00000624659 623 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.44□□□□□ -1.86
MT-ND1P03886 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.44□□□□□ -1.86
MT-ND1P03886 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.44□□□□□ -1.86
MT-ND1P03886 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
MT-ND1P03886 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.44□□□□□ -1.86
MT-ND1P03886 RIOK3P1-201ENST00000418778 1528 ntBASIC3.44□□□□□ -1.86
MT-ND1P03886 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
MT-ND1P03886 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
MT-ND1P03886 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
MT-ND1P03886 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
MT-ND1P03886 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
MT-ND1P03886 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
MT-ND1P03886 ZNF876P-202ENST00000398732 1485 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
MT-ND1P03886 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
MT-ND1P03886 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.43□□□□□ -1.86
MT-ND1P03886 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
MT-ND1P03886 AP001148.1-201ENST00000624124 2359 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
MT-ND1P03886 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
MT-ND1P03886 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
MT-ND1P03886 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
MT-ND1P03886 RNU6-582P-201ENST00000362989 107 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 RNA5SP42-201ENST00000364278 115 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 AP002088.1-201ENST00000382740 395 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 RNU6-629P-201ENST00000384061 103 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 RNU6-413P-201ENST00000384115 107 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 RNU6-761P-201ENST00000384148 107 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
MT-ND1P03886 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
MT-ND1P03886 RNA5SP424-201ENST00000390988 115 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 RN7SKP285-201ENST00000410137 318 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 AL159169.1-201ENST00000421119 127 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.43□□□□□ -1.86
MT-ND1P03886 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.43□□□□□ -1.86
MT-ND1P03886 AC006548.1-201ENST00000427470 102 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.43□□□□□ -1.86
MT-ND1P03886 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.43□□□□□ -1.86
MT-ND1P03886 NDUFA5P7-201ENST00000452914 242 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.43□□□□□ -1.86
MT-ND1P03886 RPL23AP14-201ENST00000468281 468 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 AC011979.1-201ENST00000472300 483 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 AC084357.1-201ENST00000473404 255 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 AC078785.3-201ENST00000476607 425 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 AC026979.1-201ENST00000492525 396 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.43□□□□□ -1.86
MT-ND1P03886 UBE2CP3-201ENST00000502715 450 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
MT-ND1P03886 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
MT-ND1P03886 ARL2BPP6-201ENST00000512757 439 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.43□□□□□ -1.86
MT-ND1P03886 RNU6-352P-201ENST00000516908 107 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 RNA5SP135-201ENST00000517019 125 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.43□□□□□ -1.86
MT-ND1P03886 ARL2BPP5-201ENST00000523141 481 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
MT-ND1P03886 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.43□□□□□ -1.86
MT-ND1P03886 AC023538.1-201ENST00000534576 736 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 AC011602.1-201ENST00000546484 331 ntBASIC3.43□□□□□ -1.86
MT-ND1P03886 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.43□□□□□ -1.86
MT-ND1P03886 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms