Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.64□□□□□ -1.99
TNFP01375 AC005912.1-201ENST00000495392 255 ntBASIC2.64□□□□□ -1.99
TNFP01375 AC023050.1-201ENST00000498198 304 ntBASIC2.64□□□□□ -1.99
TNFP01375 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.64□□□□□ -1.99
TNFP01375 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.64□□□□□ -1.99
TNFP01375 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.64□□□□□ -1.99
TNFP01375 AL451074.6-201ENST00000608512 729 ntBASIC2.64□□□□□ -1.99
TNFP01375 AC004832.5-201ENST00000608677 401 ntBASIC2.64□□□□□ -1.99
TNFP01375 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.64□□□□□ -1.99
TNFP01375 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.64□□□□□ -1.99
TNFP01375 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TNFP01375 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TNFP01375 TAB3P1-202ENST00000452645 1634 ntBASIC2.64□□□□□ -1.99
TNFP01375 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.64□□□□□ -1.99
TNFP01375 XPOTP1-201ENST00000443317 2398 ntBASIC2.64□□□□□ -1.99
TNFP01375 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
TNFP01375 AL118496.1-201ENST00000440201 1812 ntBASIC2.63□□□□□ -1.99
TNFP01375 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
TNFP01375 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.63□□□□□ -1.99
TNFP01375 AP003122.5-201ENST00000527668 3766 ntBASIC2.63□□□□□ -1.99
TNFP01375 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
TNFP01375 SNORA51.4-201ENST00000364993 124 ntBASIC2.63□□□□□ -1.99
TNFP01375 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.63□□□□□ -1.99
TNFP01375 RNA5SP80-201ENST00000410475 111 ntBASIC2.63□□□□□ -1.99
TNFP01375 RPL7P46-201ENST00000425129 740 ntBASIC2.63□□□□□ -1.99
TNFP01375 AC244505.4-201ENST00000434905 287 ntBASIC2.63□□□□□ -1.99
TNFP01375 AL662791.1-201ENST00000441992 928 ntBASIC2.63□□□□□ -1.99
TNFP01375 SSXP5-201ENST00000443473 287 ntBASIC2.63□□□□□ -1.99
TNFP01375 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.63□□□□□ -1.99
TNFP01375 RPS26P21-201ENST00000475397 348 ntBASIC2.63□□□□□ -1.99
TNFP01375 AC012181.1-201ENST00000479895 423 ntBASIC2.63□□□□□ -1.99
TNFP01375 AC006483.1-201ENST00000487308 313 ntBASIC2.63□□□□□ -1.99
TNFP01375 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.63□□□□□ -1.99
TNFP01375 TMEM248P1-201ENST00000510579 951 ntBASIC2.63□□□□□ -1.99
TNFP01375 AP003102.1-201ENST00000525638 661 ntBASIC2.63□□□□□ -1.99
TNFP01375 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.63□□□□□ -1.99
TNFP01375 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.63□□□□□ -1.99
TNFP01375 LLPHP1-201ENST00000603571 367 ntBASIC2.63□□□□□ -1.99
TNFP01375 AC091488.1-201ENST00000604239 660 ntBASIC2.63□□□□□ -1.99
TNFP01375 AP003117.2-201ENST00000606010 545 ntBASIC2.63□□□□□ -1.99
TNFP01375 AC090425.2-201ENST00000608818 501 ntBASIC2.63□□□□□ -1.99
TNFP01375 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
TNFP01375 IGHVIII-44-202ENST00000636235 289 ntBASIC2.63□□□□□ -1.99
TNFP01375 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.63□□□□□ -1.99
TNFP01375 AC104446.1-201ENST00000613728 1321 ntBASIC2.63□□□□□ -1.99
TNFP01375 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
TNFP01375 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.62□□□□□ -1.99
TNFP01375 AP000526.1-201ENST00000603308 1388 ntBASIC2.62□□□□□ -1.99
TNFP01375 GABRG2-229ENST00000641017 3628 ntBASIC2.62□□□□□ -1.99
TNFP01375 GTF2H2B-203ENST00000508065 1432 ntBASIC2.62□□□□□ -1.99
TNFP01375 RNA5SP68-201ENST00000363885 119 ntBASIC2.62□□□□□ -1.99
TNFP01375 AL356057.3-201ENST00000402607 340 ntBASIC2.62□□□□□ -1.99
TNFP01375 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.62□□□□□ -1.99
TNFP01375 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.62□□□□□ -1.99
TNFP01375 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.62□□□□□ -1.99
TNFP01375 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
TNFP01375 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.62□□□□□ -1.99
TNFP01375 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.62□□□□□ -1.99
TNFP01375 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.62□□□□□ -1.99
TNFP01375 AC104308.1-201ENST00000454621 333 ntBASIC2.62□□□□□ -1.99
TNFP01375 NECAP1P2-201ENST00000455668 727 ntBASIC2.62□□□□□ -1.99
TNFP01375 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.62□□□□□ -1.99
TNFP01375 AC090525.1-201ENST00000479116 478 ntBASIC2.62□□□□□ -1.99
TNFP01375 AC108860.1-201ENST00000484521 383 ntBASIC2.62□□□□□ -1.99
TNFP01375 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.62□□□□□ -1.99
TNFP01375 AC078918.1-201ENST00000498515 228 ntBASIC2.62□□□□□ -1.99
TNFP01375 AC005351.1-201ENST00000511152 786 ntBASIC2.62□□□□□ -1.99
TNFP01375 RNU4-29P-201ENST00000515943 174 ntBASIC2.62□□□□□ -1.99
TNFP01375 AC005046.1-201ENST00000608515 625 ntBASIC2.62□□□□□ -1.99
TNFP01375 AC121761.2-201ENST00000617300 689 ntBASIC2.62□□□□□ -1.99
TNFP01375 ASNSP3-201ENST00000451989 1306 ntBASIC2.62□□□□□ -1.99
TNFP01375 AL355578.1-201ENST00000607405 1328 ntBASIC2.62□□□□□ -1.99
TNFP01375 MTCO1P24-201ENST00000515438 1558 ntBASIC2.61□□□□□ -1.99
TNFP01375 AL049780.3-201ENST00000624612 1583 ntBASIC2.61□□□□□ -1.99
TNFP01375 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TNFP01375 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
TNFP01375 AC117529.2-201ENST00000512159 2068 ntBASIC2.61□□□□□ -1.99
TNFP01375 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
TNFP01375 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
TNFP01375 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TNFP01375 RPL23AP47-201ENST00000408017 460 ntBASIC2.61□□□□□ -1.99
TNFP01375 AL139413.1-201ENST00000421309 217 ntBASIC2.61□□□□□ -1.99
TNFP01375 TRIM60P18-201ENST00000441518 828 ntBASIC2.61□□□□□ -1.99
TNFP01375 HSPE1P28-201ENST00000443139 211 ntBASIC2.61□□□□□ -1.99
TNFP01375 AC093392.2-201ENST00000450682 337 ntBASIC2.61□□□□□ -1.99
TNFP01375 RPS27AP1-201ENST00000475545 471 ntBASIC2.61□□□□□ -1.99
TNFP01375 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.61□□□□□ -1.99
TNFP01375 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.61□□□□□ -1.99
TNFP01375 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC2.61□□□□□ -1.99
TNFP01375 AC010486.1-201ENST00000511793 424 ntBASIC2.61□□□□□ -1.99
TNFP01375 AC017037.2-201ENST00000513850 890 ntBASIC2.61□□□□□ -1.99
TNFP01375 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.61□□□□□ -1.99
TNFP01375 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.61□□□□□ -1.99
TNFP01375 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.61□□□□□ -1.99
TNFP01375 AL133393.1-201ENST00000603277 287 ntBASIC2.61□□□□□ -1.99
TNFP01375 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.61□□□□□ -1.99
TNFP01375 AP004607.9-201ENST00000618202 316 ntBASIC2.61□□□□□ -1.99
TNFP01375 AC092184.1-201ENST00000625042 715 ntBASIC2.61□□□□□ -1.99
TNFP01375 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.61□□□□□ -1.99
TNFP01375 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms