Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 EI24P2-201ENST00000397776 1076 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 AC010385.1-201ENST00000412374 256 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 AL024507.1-201ENST00000412741 274 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 EEF1A1P41-201ENST00000414667 207 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.26□□□□□ -1.89
CTDNEP1O95476 MED6P1-201ENST00000439659 713 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.26□□□□□ -1.89
CTDNEP1O95476 AC112492.1-201ENST00000449607 712 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 AL353718.1-201ENST00000451028 517 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.26□□□□□ -1.89
CTDNEP1O95476 CABYRP1-201ENST00000465493 1045 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 AP002884.2-201ENST00000471647 395 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 AC083906.5-201ENST00000503722 328 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.26□□□□□ -1.89
CTDNEP1O95476 HIGD1AP13-201ENST00000509878 289 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.26□□□□□ -1.89
CTDNEP1O95476 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.26□□□□□ -1.89
CTDNEP1O95476 MTND2P7-201ENST00000521337 640 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 AC113192.3-201ENST00000529152 742 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 OR5D17P-201ENST00000531492 978 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTDNEP1O95476 CR383656.14-201ENST00000551951 406 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 LINC00557-201ENST00000563184 1279 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 MTND4LP24-201ENST00000572277 291 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 AC006116.7-201ENST00000590141 756 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.26□□□□□ -1.89
CTDNEP1O95476 AC024153.1-201ENST00000603103 365 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 AC135178.6-201ENST00000605314 398 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 AC018754.1-201ENST00000607486 925 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.26□□□□□ -1.89
CTDNEP1O95476 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 AC006065.5-201ENST00000623427 349 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CTDNEP1O95476 AL672296.1-201ENST00000427780 2158 ntBASIC3.26□□□□□ -1.89
CTDNEP1O95476 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.26□□□□□ -1.89
CTDNEP1O95476 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CTDNEP1O95476 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CTDNEP1O95476 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTDNEP1O95476 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
CTDNEP1O95476 RNA5SP387-201ENST00000364226 106 ntBASIC3.25□□□□□ -1.89
CTDNEP1O95476 RNA5SP189-201ENST00000364920 115 ntBASIC3.25□□□□□ -1.89
CTDNEP1O95476 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CTDNEP1O95476 RNU6-851P-201ENST00000384565 107 ntBASIC3.25□□□□□ -1.89
CTDNEP1O95476 MIR153-1-201ENST00000384914 90 ntBASIC3.25□□□□□ -1.89
CTDNEP1O95476 AL355379.1-201ENST00000405542 640 ntBASIC3.25□□□□□ -1.89
CTDNEP1O95476 AC105402.1-201ENST00000413336 545 ntBASIC3.25□□□□□ -1.89
CTDNEP1O95476 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.25□□□□□ -1.89
CTDNEP1O95476 AL513043.1-201ENST00000439124 535 ntBASIC3.25□□□□□ -1.89
CTDNEP1O95476 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.25□□□□□ -1.89
CTDNEP1O95476 AL135938.1-201ENST00000443141 297 ntBASIC3.25□□□□□ -1.89
CTDNEP1O95476 GAPDHP27-201ENST00000447427 1020 ntBASIC3.25□□□□□ -1.89
CTDNEP1O95476 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.25□□□□□ -1.89
CTDNEP1O95476 AC093663.2-201ENST00000484625 313 ntBASIC3.25□□□□□ -1.89
CTDNEP1O95476 AC078918.1-201ENST00000498515 228 ntBASIC3.25□□□□□ -1.89
CTDNEP1O95476 AC103833.1-201ENST00000517442 172 ntBASIC3.25□□□□□ -1.89
CTDNEP1O95476 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.25□□□□□ -1.89
CTDNEP1O95476 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.25□□□□□ -1.89
CTDNEP1O95476 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.25□□□□□ -1.89
CTDNEP1O95476 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.25□□□□□ -1.89
CTDNEP1O95476 AC004923.2-201ENST00000529649 369 ntBASIC3.25□□□□□ -1.89
CTDNEP1O95476 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.25□□□□□ -1.89
CTDNEP1O95476 AL133271.1-201ENST00000538229 291 ntBASIC3.25□□□□□ -1.89
CTDNEP1O95476 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.25□□□□□ -1.89
CTDNEP1O95476 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.25□□□□□ -1.89
CTDNEP1O95476 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.25□□□□□ -1.89
CTDNEP1O95476 AC092474.3-201ENST00000603022 568 ntBASIC3.25□□□□□ -1.89
CTDNEP1O95476 AL162274.2-201ENST00000614406 332 ntBASIC3.25□□□□□ -1.89
CTDNEP1O95476 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.25□□□□□ -1.89
CTDNEP1O95476 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.25□□□□□ -1.89
CTDNEP1O95476 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.25□□□□□ -1.89
CTDNEP1O95476 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.25□□□□□ -1.89
CTDNEP1O95476 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTDNEP1O95476 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTDNEP1O95476 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CTDNEP1O95476 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CTDNEP1O95476 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CTDNEP1O95476 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CTDNEP1O95476 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CTDNEP1O95476 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
CTDNEP1O95476 AC004987.3-201ENST00000413879 771 ntBASIC3.24□□□□□ -1.89
CTDNEP1O95476 RPL21P40-201ENST00000428586 483 ntBASIC3.24□□□□□ -1.89
CTDNEP1O95476 AC073508.1-201ENST00000428866 656 ntBASIC3.24□□□□□ -1.89
CTDNEP1O95476 AC023347.2-201ENST00000433994 462 ntBASIC3.24□□□□□ -1.89
CTDNEP1O95476 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.24□□□□□ -1.89
CTDNEP1O95476 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.24□□□□□ -1.89
CTDNEP1O95476 snoU13.22-201ENST00000459428 104 ntBASIC3.24□□□□□ -1.89
CTDNEP1O95476 AC017015.1-201ENST00000477387 286 ntBASIC3.24□□□□□ -1.89
CTDNEP1O95476 AC090525.1-201ENST00000479116 478 ntBASIC3.24□□□□□ -1.89
CTDNEP1O95476 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.24□□□□□ -1.89
CTDNEP1O95476 AC011825.1-201ENST00000484967 388 ntBASIC3.24□□□□□ -1.89
CTDNEP1O95476 AC107398.1-201ENST00000486904 505 ntBASIC3.24□□□□□ -1.89
CTDNEP1O95476 OR9N1P-202ENST00000494289 481 ntBASIC3.24□□□□□ -1.89
CTDNEP1O95476 AC080014.1-201ENST00000496877 1201 ntBASIC3.24□□□□□ -1.89
CTDNEP1O95476 AC025768.1-201ENST00000510057 267 ntBASIC3.24□□□□□ -1.89
CTDNEP1O95476 SNORA74D-201ENST00000516404 141 ntBASIC3.24□□□□□ -1.89
CTDNEP1O95476 HPRT1P3-201ENST00000539521 576 ntBASIC3.24□□□□□ -1.89
CTDNEP1O95476 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.24□□□□□ -1.89
CTDNEP1O95476 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.24□□□□□ -1.89
CTDNEP1O95476 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.24□□□□□ -1.89
CTDNEP1O95476 AL121594.4-201ENST00000556211 1196 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms