Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.11□□□□□ -2.07
SIX6O95475 AP003117.1-201ENST00000602771 554 ntBASIC2.11□□□□□ -2.07
SIX6O95475 AC019159.1-201ENST00000605094 187 ntBASIC2.11□□□□□ -2.07
SIX6O95475 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.11□□□□□ -2.07
SIX6O95475 AC012442.3-202ENST00000636742 206 ntBASIC2.11□□□□□ -2.07
SIX6O95475 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.11□□□□□ -2.07
SIX6O95475 ZNF720P1-201ENST00000562403 1939 ntBASIC2.11□□□□□ -2.07
SIX6O95475 MTND5P3-201ENST00000438536 1800 ntBASIC2.1□□□□□ -2.07
SIX6O95475 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SIX6O95475 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.1□□□□□ -2.07
SIX6O95475 RNU1-112P-201ENST00000364401 164 ntBASIC2.1□□□□□ -2.07
SIX6O95475 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SIX6O95475 SNORA9-201ENST00000384215 133 ntBASIC2.1□□□□□ -2.07
SIX6O95475 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SIX6O95475 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.1□□□□□ -2.07
SIX6O95475 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.1□□□□□ -2.07
SIX6O95475 AC004022.2-201ENST00000413824 193 ntBASIC2.1□□□□□ -2.07
SIX6O95475 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.1□□□□□ -2.07
SIX6O95475 MTCO2P17-201ENST00000424336 677 ntBASIC2.1□□□□□ -2.07
SIX6O95475 AC073508.1-201ENST00000428866 656 ntBASIC2.1□□□□□ -2.07
SIX6O95475 AC018644.1-201ENST00000429934 551 ntBASIC2.1□□□□□ -2.07
SIX6O95475 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.1□□□□□ -2.07
SIX6O95475 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.1□□□□□ -2.07
SIX6O95475 AC007389.2-201ENST00000434630 306 ntBASIC2.1□□□□□ -2.07
SIX6O95475 AC006994.1-201ENST00000438212 839 ntBASIC2.1□□□□□ -2.07
SIX6O95475 AL031659.1-201ENST00000447075 539 ntBASIC2.1□□□□□ -2.07
SIX6O95475 AL133547.1-201ENST00000448546 220 ntBASIC2.1□□□□□ -2.07
SIX6O95475 AP002371.1-201ENST00000463604 433 ntBASIC2.1□□□□□ -2.07
SIX6O95475 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.1□□□□□ -2.07
SIX6O95475 RN7SL601P-201ENST00000471221 293 ntBASIC2.1□□□□□ -2.07
SIX6O95475 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.1□□□□□ -2.07
SIX6O95475 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.1□□□□□ -2.07
SIX6O95475 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.1□□□□□ -2.07
SIX6O95475 RPL23AP55-201ENST00000498163 452 ntBASIC2.1□□□□□ -2.07
SIX6O95475 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.1□□□□□ -2.07
SIX6O95475 OR5AK3P-201ENST00000527486 1297 ntBASIC2.1□□□□□ -2.07
SIX6O95475 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.1□□□□□ -2.07
SIX6O95475 OR5BN1P-201ENST00000532955 829 ntBASIC2.1□□□□□ -2.07
SIX6O95475 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC2.1□□□□□ -2.07
SIX6O95475 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.1□□□□□ -2.07
SIX6O95475 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.1□□□□□ -2.07
SIX6O95475 AC078814.3-201ENST00000553036 491 ntBASIC2.1□□□□□ -2.07
SIX6O95475 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.1□□□□□ -2.07
SIX6O95475 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.1□□□□□ -2.07
SIX6O95475 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.1□□□□□ -2.07
SIX6O95475 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.1□□□□□ -2.07
SIX6O95475 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
SIX6O95475 VN1R85P-201ENST00000601587 426 ntBASIC2.1□□□□□ -2.07
SIX6O95475 AC084036.1-201ENST00000609190 508 ntBASIC2.1□□□□□ -2.07
SIX6O95475 AC039056.2-201ENST00000622261 511 ntBASIC2.1□□□□□ -2.07
SIX6O95475 AL161637.1-201ENST00000622380 412 ntBASIC2.1□□□□□ -2.07
SIX6O95475 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.1□□□□□ -2.07
SIX6O95475 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SIX6O95475 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SIX6O95475 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SIX6O95475 MIR21-201ENST00000362134 72 ntBASIC2.09□□□□□ -2.07
SIX6O95475 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
SIX6O95475 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
SIX6O95475 AL138827.1-201ENST00000402666 306 ntBASIC2.09□□□□□ -2.07
SIX6O95475 FO393413.1-201ENST00000402892 195 ntBASIC2.09□□□□□ -2.07
SIX6O95475 RN7SKP263-201ENST00000411194 309 ntBASIC2.09□□□□□ -2.07
SIX6O95475 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.09□□□□□ -2.07
SIX6O95475 RPL21P112-201ENST00000434403 463 ntBASIC2.09□□□□□ -2.07
SIX6O95475 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.09□□□□□ -2.07
SIX6O95475 AL513328.1-201ENST00000446460 224 ntBASIC2.09□□□□□ -2.07
SIX6O95475 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.09□□□□□ -2.07
SIX6O95475 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.09□□□□□ -2.07
SIX6O95475 RN7SL504P-201ENST00000494496 287 ntBASIC2.09□□□□□ -2.07
SIX6O95475 RPL30P11-201ENST00000495304 339 ntBASIC2.09□□□□□ -2.07
SIX6O95475 AC083906.5-201ENST00000503722 328 ntBASIC2.09□□□□□ -2.07
SIX6O95475 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.09□□□□□ -2.07
SIX6O95475 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.09□□□□□ -2.07
SIX6O95475 RN7SKP234-201ENST00000517173 224 ntBASIC2.09□□□□□ -2.07
SIX6O95475 RNU4-60P-201ENST00000517239 135 ntBASIC2.09□□□□□ -2.07
SIX6O95475 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.09□□□□□ -2.07
SIX6O95475 PSMA2P1-201ENST00000526365 646 ntBASIC2.09□□□□□ -2.07
SIX6O95475 AP000790.1-201ENST00000528891 737 ntBASIC2.09□□□□□ -2.07
SIX6O95475 AP002404.1-201ENST00000532005 451 ntBASIC2.09□□□□□ -2.07
SIX6O95475 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SIX6O95475 AC121758.2-201ENST00000553271 193 ntBASIC2.09□□□□□ -2.07
SIX6O95475 AC105036.1-201ENST00000566222 271 ntBASIC2.09□□□□□ -2.07
SIX6O95475 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.09□□□□□ -2.07
SIX6O95475 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.09□□□□□ -2.07
SIX6O95475 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.09□□□□□ -2.07
SIX6O95475 AL592494.3-201ENST00000609485 464 ntBASIC2.09□□□□□ -2.07
SIX6O95475 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SIX6O95475 AC006249.1-201ENST00000621223 471 ntBASIC2.09□□□□□ -2.07
SIX6O95475 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SIX6O95475 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SIX6O95475 AL049780.3-201ENST00000624612 1583 ntBASIC2.09□□□□□ -2.08
SIX6O95475 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SIX6O95475 AC096656.1-201ENST00000623826 1364 ntBASIC2.09□□□□□ -2.08
SIX6O95475 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
SIX6O95475 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SIX6O95475 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SIX6O95475 RNA5SP515-201ENST00000364570 118 ntBASIC2.08□□□□□ -2.08
SIX6O95475 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SIX6O95475 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SIX6O95475 MIR937-201ENST00000401271 86 ntBASIC2.08□□□□□ -2.08
SIX6O95475 AL356057.3-201ENST00000402607 340 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms