Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC1.16□□□□□ -2.22
USH2AO75445 RNA5SP282-201ENST00000516355 108 ntBASIC1.16□□□□□ -2.22
USH2AO75445 AK6P1-201ENST00000540219 478 ntBASIC1.16□□□□□ -2.22
USH2AO75445 ZNF861P-201ENST00000588126 639 ntBASIC1.16□□□□□ -2.22
USH2AO75445 AC091046.2-201ENST00000620775 665 ntBASIC1.16□□□□□ -2.22
USH2AO75445 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
USH2AO75445 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
USH2AO75445 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
USH2AO75445 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
USH2AO75445 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
USH2AO75445 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.15□□□□□ -2.22
USH2AO75445 RPL29P29-201ENST00000448725 423 ntBASIC1.15□□□□□ -2.22
USH2AO75445 RN7SL93P-201ENST00000463035 293 ntBASIC1.15□□□□□ -2.22
USH2AO75445 AC126177.3-201ENST00000551839 688 ntBASIC1.15□□□□□ -2.22
USH2AO75445 AC026464.5-201ENST00000562497 722 ntBASIC1.15□□□□□ -2.22
USH2AO75445 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC1.15□□□□□ -2.22
USH2AO75445 AC005332.5-201ENST00000591222 2919 ntBASIC1.15□□□□□ -2.22
USH2AO75445 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.22
USH2AO75445 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.15□□□□□ -2.22
USH2AO75445 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.15□□□□□ -2.22
USH2AO75445 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
USH2AO75445 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
USH2AO75445 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.22
USH2AO75445 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
USH2AO75445 RNU6-1-201ENST00000383898 107 ntBASIC1.15□□□□□ -2.23
USH2AO75445 RNU6-42P-201ENST00000384165 107 ntBASIC1.15□□□□□ -2.23
USH2AO75445 RNU6-36P-201ENST00000384172 107 ntBASIC1.15□□□□□ -2.23
USH2AO75445 RNU6-4P-201ENST00000384205 107 ntBASIC1.15□□□□□ -2.23
USH2AO75445 RNU6-5P-201ENST00000384238 107 ntBASIC1.15□□□□□ -2.23
USH2AO75445 RNU6-3P-201ENST00000384314 107 ntBASIC1.15□□□□□ -2.23
USH2AO75445 RNU6-2-201ENST00000384627 107 ntBASIC1.15□□□□□ -2.23
USH2AO75445 RNU6-9-201ENST00000384776 107 ntBASIC1.15□□□□□ -2.23
USH2AO75445 RNU6-33P-201ENST00000384793 107 ntBASIC1.15□□□□□ -2.23
USH2AO75445 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC1.15□□□□□ -2.23
USH2AO75445 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.15□□□□□ -2.23
USH2AO75445 AL450263.2-201ENST00000439400 589 ntBASIC1.15□□□□□ -2.23
USH2AO75445 MTND2P25-201ENST00000449028 610 ntBASIC1.15□□□□□ -2.23
USH2AO75445 AC092798.1-201ENST00000458542 409 ntBASIC1.15□□□□□ -2.23
USH2AO75445 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC1.15□□□□□ -2.23
USH2AO75445 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC1.15□□□□□ -2.23
USH2AO75445 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC1.15□□□□□ -2.23
USH2AO75445 RNA5SP476-201ENST00000516613 103 ntBASIC1.15□□□□□ -2.23
USH2AO75445 AC138832.1-201ENST00000522871 556 ntBASIC1.15□□□□□ -2.23
USH2AO75445 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.15□□□□□ -2.23
USH2AO75445 RNU6-6P-201ENST00000606623 107 ntBASIC1.15□□□□□ -2.23
USH2AO75445 KPNA2P2-201ENST00000419546 1489 ntBASIC1.15□□□□□ -2.23
USH2AO75445 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
USH2AO75445 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
USH2AO75445 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
USH2AO75445 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC1.15□□□□□ -2.23
USH2AO75445 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
USH2AO75445 RNU6-707P-201ENST00000364647 95 ntBASIC1.15□□□□□ -2.23
USH2AO75445 RNA5SP103-201ENST00000459503 118 ntBASIC1.15□□□□□ -2.23
USH2AO75445 SNORA31.1-201ENST00000515993 133 ntBASIC1.15□□□□□ -2.23
USH2AO75445 SNORA31.5-201ENST00000516190 133 ntBASIC1.15□□□□□ -2.23
USH2AO75445 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC1.15□□□□□ -2.23
USH2AO75445 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC1.15□□□□□ -2.23
USH2AO75445 AC005951.1-201ENST00000576706 485 ntBASIC1.15□□□□□ -2.23
USH2AO75445 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
USH2AO75445 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
USH2AO75445 AC093010.3-201ENST00000570269 15214 ntBASIC1.15□□□□□ -2.23
USH2AO75445 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
USH2AO75445 AC025125.1-201ENST00000624743 1922 ntBASIC1.15□□□□□ -2.23
USH2AO75445 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC1.15□□□□□ -2.23
USH2AO75445 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
USH2AO75445 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
USH2AO75445 SNORD74.4-201ENST00000364129 80 ntBASIC1.15□□□□□ -2.23
USH2AO75445 RHOT1P2-201ENST00000366423 333 ntBASIC1.15□□□□□ -2.23
USH2AO75445 AL023284.1-201ENST00000403956 276 ntBASIC1.15□□□□□ -2.23
USH2AO75445 RPL30P2-201ENST00000414021 291 ntBASIC1.15□□□□□ -2.23
USH2AO75445 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.15□□□□□ -2.23
USH2AO75445 TRBV26-201ENST00000456572 344 ntBASIC1.15□□□□□ -2.23
USH2AO75445 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.15□□□□□ -2.23
USH2AO75445 AC010307.1-201ENST00000467206 836 ntBASIC1.15□□□□□ -2.23
USH2AO75445 KCTD9P5-201ENST00000504141 1170 ntBASIC1.15□□□□□ -2.23
USH2AO75445 AC011270.1-201ENST00000558606 583 ntBASIC1.15□□□□□ -2.23
USH2AO75445 AP001542.2-201ENST00000593141 364 ntBASIC1.15□□□□□ -2.23
USH2AO75445 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC1.15□□□□□ -2.23
USH2AO75445 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
USH2AO75445 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC1.15□□□□□ -2.23
USH2AO75445 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
USH2AO75445 AC245100.2-201ENST00000454544 1679 ntBASIC1.15□□□□□ -2.23
USH2AO75445 CUL1P1-201ENST00000509510 2425 ntBASIC1.15□□□□□ -2.23
USH2AO75445 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
USH2AO75445 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
USH2AO75445 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
USH2AO75445 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
USH2AO75445 SPA17P1-201ENST00000416656 452 ntBASIC1.14□□□□□ -2.23
USH2AO75445 NANOGP5-201ENST00000424456 877 ntBASIC1.14□□□□□ -2.23
USH2AO75445 RPS15AP17-201ENST00000470598 390 ntBASIC1.14□□□□□ -2.23
USH2AO75445 AC108078.3-201ENST00000502633 489 ntBASIC1.14□□□□□ -2.23
USH2AO75445 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.14□□□□□ -2.23
USH2AO75445 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC1.14□□□□□ -2.23
USH2AO75445 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC1.14□□□□□ -2.23
USH2AO75445 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.14□□□□□ -2.23
USH2AO75445 U4.3-201ENST00000621047 82 ntBASIC1.14□□□□□ -2.23
USH2AO75445 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
USH2AO75445 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
USH2AO75445 U3.6-201ENST00000363622 211 ntBASIC1.14□□□□□ -2.23
USH2AO75445 RNU6-1140P-201ENST00000410517 106 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms