Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.7□□□□□ -1.82
LMX1BO60663 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
LMX1BO60663 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.7□□□□□ -1.82
LMX1BO60663 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.7□□□□□ -1.82
LMX1BO60663 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
LMX1BO60663 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
LMX1BO60663 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LMX1BO60663 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.69□□□□□ -1.82
LMX1BO60663 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LMX1BO60663 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LMX1BO60663 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LMX1BO60663 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.69□□□□□ -1.82
LMX1BO60663 ZNF37BP-203ENST00000452306 1352 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LMX1BO60663 MIR448-201ENST00000362131 111 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 RNU6-251P-201ENST00000363235 104 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 SNORA51.12-201ENST00000384448 134 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 RPS24P12-201ENST00000402084 394 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 RNA5SP317-201ENST00000410176 116 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 RNU6-272P-201ENST00000411028 104 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 RNA5SP311-201ENST00000411290 116 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 AC022028.1-201ENST00000412054 408 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.69□□□□□ -1.82
LMX1BO60663 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.69□□□□□ -1.82
LMX1BO60663 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LMX1BO60663 MTND1P23-201ENST00000416931 372 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.69□□□□□ -1.82
LMX1BO60663 AC048351.1-201ENST00000420064 602 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LMX1BO60663 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.69□□□□□ -1.82
LMX1BO60663 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.69□□□□□ -1.82
LMX1BO60663 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.69□□□□□ -1.82
LMX1BO60663 AL365184.2-201ENST00000431139 435 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
LMX1BO60663 AL132765.1-201ENST00000434165 553 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 RPL23AP89-201ENST00000439324 255 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LMX1BO60663 AC004865.1-201ENST00000442276 1003 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 AC093392.2-201ENST00000450682 337 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 SSXP1-201ENST00000453640 473 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 MTCYBP17-201ENST00000503579 789 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 AC108475.1-201ENST00000507880 950 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.69□□□□□ -1.82
LMX1BO60663 SAP18P1-201ENST00000512058 390 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 MTCYBP43-201ENST00000513621 740 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 RNA5SP315-201ENST00000516340 116 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 RNU6-347P-201ENST00000516658 105 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 RNA5SP312-201ENST00000517068 116 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.69□□□□□ -1.82
LMX1BO60663 AC027309.2-201ENST00000520566 192 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.69□□□□□ -1.82
LMX1BO60663 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.69□□□□□ -1.82
LMX1BO60663 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.69□□□□□ -1.82
LMX1BO60663 AC245505.1-201ENST00000556398 224 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 AL596327.1-201ENST00000603629 213 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 AL139395.1-201ENST00000603662 160 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 AC091805.2-201ENST00000603848 235 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 AC113403.1-201ENST00000604910 193 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 AC107214.2-201ENST00000608204 634 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.69□□□□□ -1.82
LMX1BO60663 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.69□□□□□ -1.82
LMX1BO60663 BMS1P21-201ENST00000634565 365 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
LMX1BO60663 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
LMX1BO60663 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
LMX1BO60663 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LMX1BO60663 AC092447.7-201ENST00000422212 1621 ntBASIC3.69□□□□□ -1.82
LMX1BO60663 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
LMX1BO60663 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
LMX1BO60663 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.69□□□□□ -1.82
LMX1BO60663 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
LMX1BO60663 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LMX1BO60663 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.69□□□□□ -1.82
LMX1BO60663 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
LMX1BO60663 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
LMX1BO60663 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
LMX1BO60663 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LMX1BO60663 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LMX1BO60663 RN7SKP280-201ENST00000364196 304 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.68□□□□□ -1.82
LMX1BO60663 OR52E6-202ENST00000379946 954 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
LMX1BO60663 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
LMX1BO60663 RN7SKP202-201ENST00000410439 330 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 RN7SKP33-201ENST00000410942 340 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 AL389915.1-201ENST00000422463 466 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.68□□□□□ -1.82
LMX1BO60663 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.68□□□□□ -1.82
LMX1BO60663 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.68□□□□□ -1.82
LMX1BO60663 ELOCP18-201ENST00000434209 337 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 CEACAMP1-201ENST00000434624 1035 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 UBE2FP3-201ENST00000436366 524 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 MTATP6P13-201ENST00000438531 667 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 DNAJC19P4-201ENST00000440115 345 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 MTATP6P23-201ENST00000440153 476 ntBASIC3.68□□□□□ -1.82
LMX1BO60663 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.68□□□□□ -1.82
LMX1BO60663 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.68□□□□□ -1.82
LMX1BO60663 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.68□□□□□ -1.82
LMX1BO60663 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms