Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC241520.1-201ENST00000422654 1099 ntBASIC3.52□□□□□ -1.85
MSH4O15457 AC092832.1-201ENST00000422934 400 ntBASIC3.52□□□□□ -1.85
MSH4O15457 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.52□□□□□ -1.85
MSH4O15457 RPL36P19-201ENST00000430744 301 ntBASIC3.52□□□□□ -1.85
MSH4O15457 AL512637.2-201ENST00000431287 1256 ntBASIC3.52□□□□□ -1.85
MSH4O15457 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.52□□□□□ -1.85
MSH4O15457 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.52□□□□□ -1.85
MSH4O15457 RPL29P29-201ENST00000448725 423 ntBASIC3.52□□□□□ -1.85
MSH4O15457 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.52□□□□□ -1.85
MSH4O15457 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
MSH4O15457 RPS4XP22-201ENST00000480755 780 ntBASIC3.52□□□□□ -1.85
MSH4O15457 SNX5P1-201ENST00000505757 1041 ntBASIC3.52□□□□□ -1.85
MSH4O15457 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.52□□□□□ -1.85
MSH4O15457 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.52□□□□□ -1.85
MSH4O15457 AC008885.1-201ENST00000514930 301 ntBASIC3.52□□□□□ -1.85
MSH4O15457 RNU6-488P-201ENST00000515918 99 ntBASIC3.52□□□□□ -1.85
MSH4O15457 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.52□□□□□ -1.85
MSH4O15457 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.52□□□□□ -1.85
MSH4O15457 AC124293.1-201ENST00000530034 493 ntBASIC3.52□□□□□ -1.85
MSH4O15457 YWHAQP7-201ENST00000603536 658 ntBASIC3.52□□□□□ -1.85
MSH4O15457 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.52□□□□□ -1.85
MSH4O15457 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.52□□□□□ -1.85
MSH4O15457 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.52□□□□□ -1.85
MSH4O15457 AP001002.2-201ENST00000625137 386 ntBASIC3.52□□□□□ -1.85
MSH4O15457 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MSH4O15457 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
MSH4O15457 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.52□□□□□ -1.85
MSH4O15457 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.52□□□□□ -1.85
MSH4O15457 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
MSH4O15457 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
MSH4O15457 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.51□□□□□ -1.85
MSH4O15457 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
MSH4O15457 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
MSH4O15457 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
MSH4O15457 RNU6-525P-201ENST00000363685 104 ntBASIC3.51□□□□□ -1.85
MSH4O15457 RNA5SP107-201ENST00000411358 122 ntBASIC3.51□□□□□ -1.85
MSH4O15457 RPS7P13-201ENST00000413955 498 ntBASIC3.51□□□□□ -1.85
MSH4O15457 AC008280.1-201ENST00000418851 412 ntBASIC3.51□□□□□ -1.85
MSH4O15457 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.51□□□□□ -1.85
MSH4O15457 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
MSH4O15457 Z77249.1-201ENST00000444622 1175 ntBASIC3.51□□□□□ -1.85
MSH4O15457 AL096829.2-201ENST00000446582 742 ntBASIC3.51□□□□□ -1.85
MSH4O15457 AC016696.1-201ENST00000446949 318 ntBASIC3.51□□□□□ -1.85
MSH4O15457 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
MSH4O15457 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.51□□□□□ -1.85
MSH4O15457 AC006539.3-201ENST00000454258 129 ntBASIC3.51□□□□□ -1.85
MSH4O15457 SNRPGP5-201ENST00000456003 220 ntBASIC3.51□□□□□ -1.85
MSH4O15457 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.51□□□□□ -1.85
MSH4O15457 DSTNP2-201ENST00000504533 515 ntBASIC3.51□□□□□ -1.85
MSH4O15457 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.51□□□□□ -1.85
MSH4O15457 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.51□□□□□ -1.85
MSH4O15457 AC016065.2-201ENST00000514530 444 ntBASIC3.51□□□□□ -1.85
MSH4O15457 RNU6-416P-201ENST00000516265 103 ntBASIC3.51□□□□□ -1.85
MSH4O15457 Vault.1-201ENST00000516474 102 ntBASIC3.51□□□□□ -1.85
MSH4O15457 HIGD1AP6-201ENST00000521833 279 ntBASIC3.51□□□□□ -1.85
MSH4O15457 MIR4789-201ENST00000577469 82 ntBASIC3.51□□□□□ -1.85
MSH4O15457 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.51□□□□□ -1.85
MSH4O15457 AC121761.2-201ENST00000617300 689 ntBASIC3.51□□□□□ -1.85
MSH4O15457 AC099506.2-201ENST00000623074 221 ntBASIC3.51□□□□□ -1.85
MSH4O15457 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.51□□□□□ -1.85
MSH4O15457 AL590396.4-201ENST00000636779 956 ntBASIC3.51□□□□□ -1.85
MSH4O15457 MIR622-201ENST00000638396 96 ntBASIC3.51□□□□□ -1.85
MSH4O15457 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
MSH4O15457 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
MSH4O15457 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
MSH4O15457 MTND5P24-201ENST00000438892 1767 ntBASIC3.51□□□□□ -1.85
MSH4O15457 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
MSH4O15457 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
MSH4O15457 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
MSH4O15457 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
MSH4O15457 RNU6-1243P-201ENST00000364028 107 ntBASIC3.5□□□□□ -1.85
MSH4O15457 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
MSH4O15457 SNORD15B-201ENST00000384714 146 ntBASIC3.5□□□□□ -1.85
MSH4O15457 SNORD67-201ENST00000390833 111 ntBASIC3.5□□□□□ -1.85
MSH4O15457 RPL22P22-201ENST00000395439 379 ntBASIC3.5□□□□□ -1.85
MSH4O15457 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.5□□□□□ -1.85
MSH4O15457 AL009174.1-201ENST00000426577 416 ntBASIC3.5□□□□□ -1.85
MSH4O15457 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.5□□□□□ -1.85
MSH4O15457 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.5□□□□□ -1.85
MSH4O15457 CKS1BP5-201ENST00000434172 273 ntBASIC3.5□□□□□ -1.85
MSH4O15457 USP9YP7-201ENST00000436723 430 ntBASIC3.5□□□□□ -1.85
MSH4O15457 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.5□□□□□ -1.85
MSH4O15457 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.5□□□□□ -1.85
MSH4O15457 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.5□□□□□ -1.85
MSH4O15457 AC002542.1-201ENST00000440683 193 ntBASIC3.5□□□□□ -1.85
MSH4O15457 USP9YP32-201ENST00000452432 430 ntBASIC3.5□□□□□ -1.85
MSH4O15457 RPS15AP1-201ENST00000457423 391 ntBASIC3.5□□□□□ -1.85
MSH4O15457 snoU13.24-201ENST00000458998 104 ntBASIC3.5□□□□□ -1.85
MSH4O15457 AP001992.1-205ENST00000462248 379 ntBASIC3.5□□□□□ -1.85
MSH4O15457 RPL6P9-201ENST00000466502 859 ntBASIC3.5□□□□□ -1.85
MSH4O15457 RN7SL442P-201ENST00000473804 320 ntBASIC3.5□□□□□ -1.85
MSH4O15457 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.5□□□□□ -1.85
MSH4O15457 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.5□□□□□ -1.85
MSH4O15457 AC093755.1-201ENST00000512950 1023 ntBASIC3.5□□□□□ -1.85
MSH4O15457 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.5□□□□□ -1.85
MSH4O15457 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.5□□□□□ -1.85
MSH4O15457 AC104115.2-201ENST00000523026 687 ntBASIC3.5□□□□□ -1.85
MSH4O15457 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.5□□□□□ -1.85
MSH4O15457 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.5□□□□□ -1.85
MSH4O15457 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms