Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.25□□□□□ -1.89
LSM1O15116 AC092170.1-201ENST00000440211 356 ntBASIC3.25□□□□□ -1.89
LSM1O15116 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.25□□□□□ -1.89
LSM1O15116 AC104073.1-201ENST00000451988 151 ntBASIC3.25□□□□□ -1.89
LSM1O15116 HMGB1P15-201ENST00000453854 435 ntBASIC3.25□□□□□ -1.89
LSM1O15116 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.25□□□□□ -1.89
LSM1O15116 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.25□□□□□ -1.89
LSM1O15116 PLGLA-201ENST00000465668 449 ntBASIC3.25□□□□□ -1.89
LSM1O15116 AC091959.2-201ENST00000477363 321 ntBASIC3.25□□□□□ -1.89
LSM1O15116 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.25□□□□□ -1.89
LSM1O15116 AC112198.1-201ENST00000505369 1220 ntBASIC3.25□□□□□ -1.89
LSM1O15116 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LSM1O15116 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LSM1O15116 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.25□□□□□ -1.89
LSM1O15116 SNORA64.4-201ENST00000516632 81 ntBASIC3.25□□□□□ -1.89
LSM1O15116 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.25□□□□□ -1.89
LSM1O15116 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
LSM1O15116 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.25□□□□□ -1.89
LSM1O15116 AC124293.1-201ENST00000530034 493 ntBASIC3.25□□□□□ -1.89
LSM1O15116 AC022069.1-201ENST00000582910 658 ntBASIC3.25□□□□□ -1.89
LSM1O15116 AL020997.3-201ENST00000602843 359 ntBASIC3.25□□□□□ -1.89
LSM1O15116 AC105227.2-201ENST00000615075 605 ntBASIC3.25□□□□□ -1.89
LSM1O15116 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.25□□□□□ -1.89
LSM1O15116 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.25□□□□□ -1.89
LSM1O15116 AC068831.8-201ENST00000620171 435 ntBASIC3.25□□□□□ -1.89
LSM1O15116 AP006248.3-201ENST00000623580 594 ntBASIC3.25□□□□□ -1.89
LSM1O15116 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.25□□□□□ -1.89
LSM1O15116 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.25□□□□□ -1.89
LSM1O15116 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LSM1O15116 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
LSM1O15116 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
LSM1O15116 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LSM1O15116 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
LSM1O15116 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
LSM1O15116 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
LSM1O15116 U3.11-201ENST00000364476 212 ntBASIC3.24□□□□□ -1.89
LSM1O15116 MT-TC-201ENST00000387405 66 ntBASIC3.24□□□□□ -1.89
LSM1O15116 AC109780.2-201ENST00000413467 845 ntBASIC3.24□□□□□ -1.89
LSM1O15116 UBE2V1P9-201ENST00000414760 368 ntBASIC3.24□□□□□ -1.89
LSM1O15116 RPL7P10-201ENST00000417407 739 ntBASIC3.24□□□□□ -1.89
LSM1O15116 FNDC3CP-201ENST00000420795 1155 ntBASIC3.24□□□□□ -1.89
LSM1O15116 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.24□□□□□ -1.89
LSM1O15116 AC233981.1-201ENST00000423224 461 ntBASIC3.24□□□□□ -1.89
LSM1O15116 AC096632.1-201ENST00000427395 310 ntBASIC3.24□□□□□ -1.89
LSM1O15116 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.24□□□□□ -1.89
LSM1O15116 AL445584.1-201ENST00000431451 330 ntBASIC3.24□□□□□ -1.89
LSM1O15116 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.24□□□□□ -1.89
LSM1O15116 ISCA1P2-201ENST00000438679 421 ntBASIC3.24□□□□□ -1.89
LSM1O15116 ELOCP3-201ENST00000439303 348 ntBASIC3.24□□□□□ -1.89
LSM1O15116 HMGB3P11-201ENST00000440127 604 ntBASIC3.24□□□□□ -1.89
LSM1O15116 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.24□□□□□ -1.89
LSM1O15116 COX6CP2-201ENST00000444980 225 ntBASIC3.24□□□□□ -1.89
LSM1O15116 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.24□□□□□ -1.89
LSM1O15116 OR52A4P-202ENST00000481634 799 ntBASIC3.24□□□□□ -1.89
LSM1O15116 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.24□□□□□ -1.89
LSM1O15116 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.24□□□□□ -1.89
LSM1O15116 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.24□□□□□ -1.89
LSM1O15116 AC103843.2-201ENST00000530523 682 ntBASIC3.24□□□□□ -1.89
LSM1O15116 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.24□□□□□ -1.89
LSM1O15116 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.24□□□□□ -1.89
LSM1O15116 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.24□□□□□ -1.89
LSM1O15116 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.24□□□□□ -1.89
LSM1O15116 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.24□□□□□ -1.89
LSM1O15116 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.24□□□□□ -1.89
LSM1O15116 AC133794.1-201ENST00000602731 914 ntBASIC3.24□□□□□ -1.89
LSM1O15116 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.24□□□□□ -1.89
LSM1O15116 VN1R9P-201ENST00000614184 867 ntBASIC3.24□□□□□ -1.89
LSM1O15116 AL121772.2-201ENST00000614331 297 ntBASIC3.24□□□□□ -1.89
LSM1O15116 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.24□□□□□ -1.89
LSM1O15116 AC084035.1-201ENST00000634543 607 ntBASIC3.24□□□□□ -1.89
LSM1O15116 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LSM1O15116 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
LSM1O15116 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LSM1O15116 AL365440.1-201ENST00000436135 2167 ntBASIC3.24□□□□□ -1.89
LSM1O15116 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LSM1O15116 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LSM1O15116 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.23□□□□□ -1.89
LSM1O15116 MTND3P20-201ENST00000407663 186 ntBASIC3.23□□□□□ -1.89
LSM1O15116 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.23□□□□□ -1.89
LSM1O15116 OR51A3P-201ENST00000413596 924 ntBASIC3.23□□□□□ -1.89
LSM1O15116 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LSM1O15116 AL445183.3-201ENST00000414168 502 ntBASIC3.23□□□□□ -1.89
LSM1O15116 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.23□□□□□ -1.89
LSM1O15116 AL139281.1-201ENST00000422120 335 ntBASIC3.23□□□□□ -1.89
LSM1O15116 KCTD10P1-201ENST00000434203 625 ntBASIC3.23□□□□□ -1.89
LSM1O15116 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.23□□□□□ -1.89
LSM1O15116 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.23□□□□□ -1.89
LSM1O15116 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LSM1O15116 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.23□□□□□ -1.89
LSM1O15116 RBMY2UP-201ENST00000453474 324 ntBASIC3.23□□□□□ -1.89
LSM1O15116 HMGN3P1-201ENST00000453847 193 ntBASIC3.23□□□□□ -1.89
LSM1O15116 RPL7P15-201ENST00000461190 712 ntBASIC3.23□□□□□ -1.89
LSM1O15116 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
LSM1O15116 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.23□□□□□ -1.89
LSM1O15116 AC068724.1-201ENST00000487100 792 ntBASIC3.23□□□□□ -1.89
LSM1O15116 AC108078.3-201ENST00000502633 489 ntBASIC3.23□□□□□ -1.89
LSM1O15116 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.23□□□□□ -1.89
LSM1O15116 AC010468.3-201ENST00000508225 458 ntBASIC3.23□□□□□ -1.89
LSM1O15116 AC104619.4-201ENST00000510773 249 ntBASIC3.23□□□□□ -1.89
LSM1O15116 SETP12-201ENST00000514068 805 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms