Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SNORA64.4-201ENST00000516632 81 ntBASIC4.04□□□□□ -1.76
CHD1O14646 RFPL1S-203ENST00000539579 330 ntBASIC4.04□□□□□ -1.76
CHD1O14646 AC090695.1-201ENST00000561269 1222 ntBASIC4.04□□□□□ -1.76
CHD1O14646 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.04□□□□□ -1.76
CHD1O14646 AC090115.4-201ENST00000609970 188 ntBASIC4.04□□□□□ -1.76
CHD1O14646 AC107081.3-201ENST00000612715 2034 ntBASIC4.04□□□□□ -1.76
CHD1O14646 Y_RNA.269-201ENST00000364685 89 ntBASIC4.04□□□□□ -1.76
CHD1O14646 MIR3074-201ENST00000384885 81 ntBASIC4.04□□□□□ -1.76
CHD1O14646 RPS29P6-201ENST00000438196 145 ntBASIC4.04□□□□□ -1.76
CHD1O14646 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CHD1O14646 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
CHD1O14646 AC021146.1-201ENST00000511202 716 ntBASIC4.04□□□□□ -1.76
CHD1O14646 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.04□□□□□ -1.76
CHD1O14646 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.04□□□□□ -1.76
CHD1O14646 MIR4644-201ENST00000579929 84 ntBASIC4.04□□□□□ -1.76
CHD1O14646 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.04□□□□□ -1.76
CHD1O14646 AC009570.1-201ENST00000609599 745 ntBASIC4.04□□□□□ -1.76
CHD1O14646 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.04□□□□□ -1.76
CHD1O14646 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHD1O14646 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CHD1O14646 AC005539.1-201ENST00000443768 1479 ntBASIC4.03□□□□□ -1.76
CHD1O14646 CYCSP20-201ENST00000473154 315 ntBASIC4.03□□□□□ -1.76
CHD1O14646 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.03□□□□□ -1.76
CHD1O14646 AC023043.2-201ENST00000589678 1026 ntBASIC4.03□□□□□ -1.76
CHD1O14646 AP003117.2-201ENST00000606010 545 ntBASIC4.03□□□□□ -1.76
CHD1O14646 AC010338.1-201ENST00000621823 717 ntBASIC4.03□□□□□ -1.76
CHD1O14646 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.03□□□□□ -1.76
CHD1O14646 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.02□□□□□ -1.77
CHD1O14646 RNU6-14P-201ENST00000384630 106 ntBASIC4.02□□□□□ -1.77
CHD1O14646 RPS7P13-201ENST00000413955 498 ntBASIC4.02□□□□□ -1.77
CHD1O14646 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.02□□□□□ -1.77
CHD1O14646 Z98742.2-201ENST00000431564 187 ntBASIC4.02□□□□□ -1.77
CHD1O14646 AC010881.1-201ENST00000433830 235 ntBASIC4.02□□□□□ -1.77
CHD1O14646 UBE2V2P4-201ENST00000447495 259 ntBASIC4.02□□□□□ -1.77
CHD1O14646 RPL23AP70-201ENST00000483361 460 ntBASIC4.02□□□□□ -1.77
CHD1O14646 RPL36AP51-201ENST00000487216 318 ntBASIC4.02□□□□□ -1.77
CHD1O14646 RNA5SP281-201ENST00000516504 135 ntBASIC4.02□□□□□ -1.77
CHD1O14646 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.02□□□□□ -1.77
CHD1O14646 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CHD1O14646 Z73965.1-201ENST00000623412 2297 ntBASIC4.02□□□□□ -1.77
CHD1O14646 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CHD1O14646 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CHD1O14646 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CHD1O14646 MIR181A2-201ENST00000384863 110 ntBASIC4.01□□□□□ -1.77
CHD1O14646 SKINT1L-201ENST00000401057 817 ntBASIC4.01□□□□□ -1.77
CHD1O14646 RNU6-321P-201ENST00000410912 106 ntBASIC4.01□□□□□ -1.77
CHD1O14646 GTF2IP23-201ENST00000423746 351 ntBASIC4.01□□□□□ -1.77
CHD1O14646 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.01□□□□□ -1.77
CHD1O14646 RPS6P12-201ENST00000432491 726 ntBASIC4.01□□□□□ -1.77
CHD1O14646 AL357520.1-201ENST00000441557 453 ntBASIC4.01□□□□□ -1.77
CHD1O14646 NIPA2P2-201ENST00000496376 1083 ntBASIC4.01□□□□□ -1.77
CHD1O14646 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.01□□□□□ -1.77
CHD1O14646 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CHD1O14646 AC107222.1-201ENST00000510899 637 ntBASIC4.01□□□□□ -1.77
CHD1O14646 AC107918.3-201ENST00000533272 382 ntBASIC4.01□□□□□ -1.77
CHD1O14646 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.01□□□□□ -1.77
CHD1O14646 MIR6873-201ENST00000622788 63 ntBASIC4.01□□□□□ -1.77
CHD1O14646 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CHD1O14646 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CHD1O14646 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CHD1O14646 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.01□□□□□ -1.77
CHD1O14646 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CHD1O14646 U8.13-201ENST00000390842 128 ntBASIC4.01□□□□□ -1.77
CHD1O14646 AC009414.1-201ENST00000427200 443 ntBASIC4.01□□□□□ -1.77
CHD1O14646 RPL23AP45-201ENST00000476406 468 ntBASIC4.01□□□□□ -1.77
CHD1O14646 AC016687.1-201ENST00000482574 353 ntBASIC4.01□□□□□ -1.77
CHD1O14646 SNORA31.1-201ENST00000515993 133 ntBASIC4.01□□□□□ -1.77
CHD1O14646 SNORA31.5-201ENST00000516190 133 ntBASIC4.01□□□□□ -1.77
CHD1O14646 MTCYBP19-201ENST00000517463 1124 ntBASIC4.01□□□□□ -1.77
CHD1O14646 AC074029.1-201ENST00000552531 1044 ntBASIC4.01□□□□□ -1.77
CHD1O14646 MTCYBP28-201ENST00000566728 1132 ntBASIC4.01□□□□□ -1.77
CHD1O14646 RPL23AP84-201ENST00000571193 464 ntBASIC4.01□□□□□ -1.77
CHD1O14646 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.01□□□□□ -1.77
CHD1O14646 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CHD1O14646 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
CHD1O14646 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4□□□□□ -1.77
CHD1O14646 AC013470.3-201ENST00000420252 1194 ntBASIC4□□□□□ -1.77
CHD1O14646 AC106872.3-201ENST00000495104 446 ntBASIC4□□□□□ -1.77
CHD1O14646 MIR2114-201ENST00000516645 80 ntBASIC4□□□□□ -1.77
CHD1O14646 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4□□□□□ -1.77
CHD1O14646 AC092851.1-201ENST00000535964 478 ntBASIC4□□□□□ -1.77
CHD1O14646 MIR4781-201ENST00000585250 76 ntBASIC4□□□□□ -1.77
CHD1O14646 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4□□□□□ -1.77
CHD1O14646 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CHD1O14646 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CHD1O14646 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CHD1O14646 AL450338.1-201ENST00000407987 512 ntBASIC3.99□□□□□ -1.77
CHD1O14646 AC069218.2-201ENST00000411665 344 ntBASIC3.99□□□□□ -1.77
CHD1O14646 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.99□□□□□ -1.77
CHD1O14646 AC105402.2-201ENST00000438503 358 ntBASIC3.99□□□□□ -1.77
CHD1O14646 PPIAP17-201ENST00000438507 471 ntBASIC3.99□□□□□ -1.77
CHD1O14646 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
CHD1O14646 FAM92A1P2-202ENST00000504766 877 ntBASIC3.99□□□□□ -1.77
CHD1O14646 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.99□□□□□ -1.77
CHD1O14646 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.99□□□□□ -1.77
CHD1O14646 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.99□□□□□ -1.77
CHD1O14646 HMGB3P26-201ENST00000560051 582 ntBASIC3.99□□□□□ -1.77
CHD1O14646 AC015911.5-201ENST00000587076 451 ntBASIC3.99□□□□□ -1.77
CHD1O14646 RNU6-84P-201ENST00000607737 102 ntBASIC3.99□□□□□ -1.77
CHD1O14646 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms