Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SLC28A1O00337 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.5□□□□□ -1.85
SLC28A1O00337 MTCO1P35-201ENST00000515270 228 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 RNU2-27P-201ENST00000516185 142 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 RNU6-579P-201ENST00000516879 102 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 SNORA31.20-201ENST00000517111 133 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC28A1O00337 MED28P5-201ENST00000528254 438 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC28A1O00337 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC28A1O00337 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.5□□□□□ -1.85
SLC28A1O00337 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC28A1O00337 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.5□□□□□ -1.85
SLC28A1O00337 AC125611.1-201ENST00000549563 229 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 PARP1P2-201ENST00000556806 195 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.5□□□□□ -1.85
SLC28A1O00337 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC28A1O00337 MIR5187-201ENST00000583479 76 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 AC021749.1-201ENST00000604322 607 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 AC006077.1-201ENST00000604746 343 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC28A1O00337 AL590282.1-201ENST00000610379 1136 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 AL138478.1-201ENST00000612252 832 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 AC023158.2-201ENST00000614876 543 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC28A1O00337 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC28A1O00337 AL121895.2-201ENST00000619558 447 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC28A1O00337 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.5□□□□□ -1.85
SLC28A1O00337 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC28A1O00337 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC28A1O00337 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SLC28A1O00337 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SLC28A1O00337 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC28A1O00337 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC28A1O00337 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SLC28A1O00337 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SLC28A1O00337 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC28A1O00337 AC004925.1-201ENST00000624256 2706 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC28A1O00337 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC28A1O00337 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC28A1O00337 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC28A1O00337 AC073073.2-201ENST00000609827 2578 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC28A1O00337 Y_RNA.472-201ENST00000384322 102 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SLC28A1O00337 U3.39-201ENST00000408569 239 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 AL161449.1-201ENST00000414531 1199 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 RPS7P15-201ENST00000415804 584 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 RAD23BP2-201ENST00000416003 1207 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 MTCO3P12-201ENST00000416718 547 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 AL139247.1-201ENST00000422768 325 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SLC28A1O00337 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SLC28A1O00337 RPL7P44-201ENST00000424827 742 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 AL158071.1-201ENST00000430315 461 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC28A1O00337 VDAC1P3-201ENST00000434069 851 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC28A1O00337 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC28A1O00337 H2AFZP6-201ENST00000444403 394 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
SLC28A1O00337 AC239367.2-201ENST00000447309 705 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 RPS24P6-201ENST00000452670 400 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 RFC5P1-201ENST00000454419 874 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 RPL23AP44-201ENST00000482216 473 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SLC28A1O00337 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC28A1O00337 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SLC28A1O00337 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC28A1O00337 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.49□□□□□ -1.85
SLC28A1O00337 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC28A1O00337 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC28A1O00337 AL139174.1-201ENST00000531489 886 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC28A1O00337 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC28A1O00337 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.49□□□□□ -1.85
SLC28A1O00337 AL121603.1-201ENST00000553815 142 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.49□□□□□ -1.85
SLC28A1O00337 MTCYBP23-201ENST00000558717 1102 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC28A1O00337 LARP7P2-201ENST00000575306 125 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 MIR3690-201ENST00000580266 75 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 MIR4425-201ENST00000580572 84 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.49□□□□□ -1.85
SLC28A1O00337 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC28A1O00337 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC28A1O00337 BNIP3P38-201ENST00000601117 544 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 RNU1-30P-201ENST00000606575 163 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC28A1O00337 AC008121.2-201ENST00000614647 523 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 MIR6875-201ENST00000617506 72 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 AC073348.1-201ENST00000623002 331 ntBASIC3.49□□□□□ -1.85
SLC28A1O00337 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC28A1O00337 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SLC28A1O00337 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC28A1O00337 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC28A1O00337 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
SLC28A1O00337 AC244517.1-201ENST00000606030 2086 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms