Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC007423.1-201ENST00000605009 627 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC1.76□□□□□ -2.13
LINC01549A6NIU2 AC024560.3-201ENST00000608482 349 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 AC084036.1-201ENST00000609190 508 ntBASIC1.76□□□□□ -2.13
LINC01549A6NIU2 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.76□□□□□ -2.13
LINC01549A6NIU2 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
LINC01549A6NIU2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
LINC01549A6NIU2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
LINC01549A6NIU2 AP000526.1-201ENST00000603308 1388 ntBASIC1.75□□□□□ -2.13
LINC01549A6NIU2 AL136520.1-201ENST00000600311 1322 ntBASIC1.75□□□□□ -2.13
LINC01549A6NIU2 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
LINC01549A6NIU2 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
LINC01549A6NIU2 MIR200C-201ENST00000384980 68 ntBASIC1.75□□□□□ -2.13
LINC01549A6NIU2 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC1.75□□□□□ -2.13
LINC01549A6NIU2 FAT1P1-201ENST00000406588 507 ntBASIC1.75□□□□□ -2.13
LINC01549A6NIU2 METTL5-204ENST00000409340 472 ntTSL 5 BASIC1.75□□□□□ -2.13
LINC01549A6NIU2 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.75□□□□□ -2.13
LINC01549A6NIU2 AL807761.1-201ENST00000417622 171 ntBASIC1.75□□□□□ -2.13
LINC01549A6NIU2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC1.75□□□□□ -2.13
LINC01549A6NIU2 WARS2P1-201ENST00000429678 537 ntBASIC1.75□□□□□ -2.13
LINC01549A6NIU2 AC091286.1-201ENST00000431233 461 ntBASIC1.75□□□□□ -2.13
LINC01549A6NIU2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.75□□□□□ -2.13
LINC01549A6NIU2 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.75□□□□□ -2.13
LINC01549A6NIU2 AC006445.1-201ENST00000491925 405 ntBASIC1.75□□□□□ -2.13
LINC01549A6NIU2 CEACAMP10-202ENST00000495431 496 ntBASIC1.75□□□□□ -2.13
LINC01549A6NIU2 AC090255.1-201ENST00000495779 349 ntBASIC1.75□□□□□ -2.13
LINC01549A6NIU2 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC1.75□□□□□ -2.13
LINC01549A6NIU2 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
LINC01549A6NIU2 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC1.75□□□□□ -2.13
LINC01549A6NIU2 AC067747.1-201ENST00000608026 250 ntBASIC1.75□□□□□ -2.13
LINC01549A6NIU2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC1.75□□□□□ -2.13
LINC01549A6NIU2 AC140725.3-201ENST00000616193 880 ntBASIC1.75□□□□□ -2.13
LINC01549A6NIU2 AP004607.9-201ENST00000618202 316 ntBASIC1.75□□□□□ -2.13
LINC01549A6NIU2 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.75□□□□□ -2.13
LINC01549A6NIU2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.75□□□□□ -2.13
LINC01549A6NIU2 AC132825.8-201ENST00000640783 297 ntBASIC1.75□□□□□ -2.13
LINC01549A6NIU2 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
LINC01549A6NIU2 AC233263.6-201ENST00000631132 1963 ntBASIC1.75□□□□□ -2.13
LINC01549A6NIU2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
LINC01549A6NIU2 ZNF720P1-201ENST00000562403 1939 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
LINC01549A6NIU2 AL049780.3-201ENST00000624612 1583 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
LINC01549A6NIU2 AC126755.2-208ENST00000327792 462 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 AC138969.1-213ENST00000331436 462 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.74□□□□□ -2.13
LINC01549A6NIU2 MIR607-201ENST00000385241 96 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
LINC01549A6NIU2 RPL31P52-201ENST00000407532 367 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 SNORA11C-201ENST00000408532 129 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 MORF4L1P7-201ENST00000426038 703 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC1.74□□□□□ -2.13
LINC01549A6NIU2 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 LSM1P1-201ENST00000438629 273 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 AL591503.2-201ENST00000442314 1005 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 RPS24P13-201ENST00000442520 397 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC1.74□□□□□ -2.13
LINC01549A6NIU2 HMGB1P5-202ENST00000451497 985 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.74□□□□□ -2.13
LINC01549A6NIU2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC1.74□□□□□ -2.13
LINC01549A6NIU2 PTGES3P3-201ENST00000511479 482 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 DUXAP2-201ENST00000519198 589 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC1.74□□□□□ -2.13
LINC01549A6NIU2 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LINC01549A6NIU2 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC1.74□□□□□ -2.13
LINC01549A6NIU2 AC243972.3-201ENST00000539655 198 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 NOP56P3-201ENST00000549457 385 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.74□□□□□ -2.13
LINC01549A6NIU2 ISCA1P3-201ENST00000577104 373 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.74□□□□□ -2.13
LINC01549A6NIU2 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.74□□□□□ -2.13
LINC01549A6NIU2 MIR7112-201ENST00000616126 65 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.74□□□□□ -2.13
LINC01549A6NIU2 AC244100.1-202ENST00000621554 382 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 MTCO1P12-201ENST00000414273 1543 ntBASIC1.74□□□□□ -2.13
LINC01549A6NIU2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
LINC01549A6NIU2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
LINC01549A6NIU2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LINC01549A6NIU2 MAPK10-266ENST00000641066 6555 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 MTCO1P24-201ENST00000515438 1558 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 SNORD62.1-201ENST00000362541 86 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 SNORA67.1-201ENST00000364749 141 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 RNU1-140P-201ENST00000365040 165 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 RNU1-51P-201ENST00000365345 176 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AC240504.1-201ENST00000395709 845 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 TANK-203ENST00000402568 878 ntTSL 5 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 RNA5SP120-201ENST00000410900 112 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AL158825.1-201ENST00000414735 521 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 NPM1P24-201ENST00000428039 894 ntBASIC1.73□□□□□ -2.13
LINC01549A6NIU2 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.73□□□□□ -2.13
LINC01549A6NIU2 ELOCP6-201ENST00000429066 328 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms