Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 AC093775.1-201ENST00000624154 1868 ntBASIC6.39□□□□□ -1.39
USP17L3A6NCW0 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
USP17L3A6NCW0 AC006206.1-201ENST00000544842 3387 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 Y_RNA.145-201ENST00000363527 102 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 RNA5SP455-201ENST00000365190 119 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 SNORA33.2-201ENST00000365413 134 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 Y_RNA.414-201ENST00000384011 101 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 RNA5SP87-201ENST00000384155 118 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 RPL5P18-201ENST00000406671 891 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 MIR1182-201ENST00000408363 97 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 COX6B1P1-201ENST00000415962 213 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 DDX39BP1-205ENST00000422507 192 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 OR2AS1P-201ENST00000427827 319 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 MTND3P2-201ENST00000438452 342 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 AC009220.1-201ENST00000451614 275 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 RPS29P33-201ENST00000456717 146 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 SNORD121B-201ENST00000458838 81 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 VN1R17P-201ENST00000472048 1090 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 CEACAMP10-202ENST00000495431 496 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 AC068305.1-201ENST00000497406 726 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 AC092436.1-201ENST00000506450 503 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 Y_RNA.711-201ENST00000516993 102 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 HMGB1P41-201ENST00000520234 440 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 EDDM3DP-201ENST00000554692 434 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 AC006116.10-201ENST00000591836 581 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 AC093838.1-201ENST00000613014 469 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 AL590099.1-201ENST00000615276 138 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 AC084781.2-201ENST00000615568 161 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 uc_338.11-201ENST00000619132 160 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 AC004076.2-201ENST00000620532 3323 ntBASIC6.38□□□□□ -1.39
USP17L3A6NCW0 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.38□□□□□ -1.39
USP17L3A6NCW0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 AP000756.2-201ENST00000624168 2567 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 AC009229.4-201ENST00000623854 1947 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 TAB3P1-202ENST00000452645 1634 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 MTND4P14-201ENST00000435799 1354 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 RNU6-511P-201ENST00000363496 107 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 Y_RNA.144-201ENST00000363521 113 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 U3.12-201ENST00000364498 214 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 Y_RNA.445-201ENST00000384168 102 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 MIR141-201ENST00000384975 95 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 RNY4P36-201ENST00000391116 96 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 RNU2-50P-201ENST00000410494 143 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 OR2AM1P-201ENST00000422137 422 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 AC239809.1-201ENST00000450470 217 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 AC012181.1-201ENST00000479895 423 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 IGLV2-34-201ENST00000490007 283 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 AL671862.1-201ENST00000515851 349 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 RNU6-864P-201ENST00000516256 108 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 AP000859.1-201ENST00000525536 307 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 MIR4703-201ENST00000577728 79 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USP17L3A6NCW0 AC025588.3-201ENST00000604182 274 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.37□□□□□ -1.39
USP17L3A6NCW0 AC015908.5-201ENST00000623289 343 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms