Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 AC108734.1-201ENST00000439549 399 ntBASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 RPL21P2-201ENST00000440049 481 ntBASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 AC093392.2-201ENST00000450682 337 ntBASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 RPL21P104-201ENST00000464143 478 ntBASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 RPS27AP1-201ENST00000475545 471 ntBASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 AC006499.5-201ENST00000505037 514 ntBASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 OR5G4P-201ENST00000525251 760 ntBASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 AL163153.1-201ENST00000554223 283 ntBASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 RPL21P12-201ENST00000559810 515 ntBASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 AL133393.1-201ENST00000603277 287 ntBASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 AC244100.1-202ENST00000621554 382 ntBASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 AC004777.1-201ENST00000624317 287 ntBASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 NSRP1P1-201ENST00000444067 1693 ntBASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 AL136164.4-201ENST00000625013 2135 ntBASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
USH1CQ9Y6N9 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 Z83843.1-201ENST00000604070 3685 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 MTND4P34-201ENST00000572715 1371 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 SNORD46.1-201ENST00000364139 104 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 RNU6-335P-201ENST00000364563 113 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 OR52E6-202ENST00000379946 954 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 AL590004.2-201ENST00000404787 371 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 RNA5SP129-201ENST00000410276 118 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 RNU2-71P-201ENST00000411395 189 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 HSFY4P-201ENST00000415994 1181 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 AC005517.2-201ENST00000424673 553 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 RPS29P6-201ENST00000438196 145 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 AL592437.1-201ENST00000443781 492 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 RPL39P40-201ENST00000445481 146 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 RPL6P5-201ENST00000445678 828 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 HMGB1P38-201ENST00000490557 577 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 GMPSP1-201ENST00000514075 579 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 AC016065.2-201ENST00000514530 444 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 RNU6-826P-201ENST00000516827 104 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 AP001207.1-201ENST00000524051 481 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 ZNF415P1-201ENST00000582279 1166 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 AC006504.3-201ENST00000586818 523 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 AC023043.3-201ENST00000593113 385 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 AC015849.2-201ENST00000605738 409 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 CR589904.2-201ENST00000612533 440 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 AC084757.4-201ENST00000616350 526 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 U73479.1-201ENST00000618062 168 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 AC244258.1-201ENST00000637553 1071 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 AC011978.2-201ENST00000569835 2054 ntBASIC3.03□□□□□ -1.92
USH1CQ9Y6N9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 AC092447.7-201ENST00000422212 1621 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 OR1S2-201ENST00000302592 978 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 MIR218-2-201ENST00000385006 110 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 AC063979.1-201ENST00000415539 377 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 RPL21P66-201ENST00000426566 466 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 MUPP-201ENST00000438111 566 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 RPL7P52-201ENST00000449200 742 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 snoU13.22-201ENST00000459428 104 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 RPL5P24-201ENST00000463742 885 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 AC008571.1-201ENST00000467232 300 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 PRDX3P4-201ENST00000470828 747 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 RPS17P11-201ENST00000474297 293 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 OR8I1P-201ENST00000529291 931 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 OR5B10P-201ENST00000532869 642 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 AL442163.2-201ENST00000553912 710 ntBASIC3.02□□□□□ -1.93
USH1CQ9Y6N9 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms