Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AL592221.1-201ENST00000605266 382 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AC233309.1-201ENST00000619522 751 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AL161637.1-201ENST00000622380 412 ntBASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SNX9Q9Y5X1 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 RNU6-931P-201ENST00000363850 107 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 Y_RNA.318-201ENST00000365131 97 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 RNU6-1200P-201ENST00000384162 107 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 MIR30B-201ENST00000384850 88 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 AL139098.1-201ENST00000407291 389 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 RNU6-272P-201ENST00000411028 104 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 AC004987.3-201ENST00000413879 771 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 MORF4L1P6-201ENST00000418771 268 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 BX119904.4-201ENST00000424402 301 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 AC234781.2-201ENST00000426370 994 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 ISCA1P2-201ENST00000438679 421 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 UBE2D3P4-201ENST00000441973 436 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 AC004865.1-201ENST00000442276 1003 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 AC118469.1-201ENST00000442943 488 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 PPIAP3-201ENST00000450588 505 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 AC097262.1-201ENST00000452559 548 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 TPTE2P5-203ENST00000458118 728 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 MTND3P7-201ENST00000474435 343 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 LINC00888-204ENST00000487386 421 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 AC147055.4-201ENST00000504399 745 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 AC111000.2-201ENST00000507775 550 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 AC109445.1-201ENST00000512356 383 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 RNU6-232P-201ENST00000517144 64 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 IGKV2D-23-201ENST00000518179 286 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 IGHV3-32-201ENST00000519182 355 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 GTF2IP8-201ENST00000560687 584 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 VN1R82P-201ENST00000601481 356 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 AC103881.1-201ENST00000603476 538 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 AC128687.2-201ENST00000609657 566 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 AL354976.1-201ENST00000613843 387 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 Z99496.1-201ENST00000469424 1477 ntBASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNX9Q9Y5X1 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AC021755.1-201ENST00000559747 1447 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 RNA5SP391-201ENST00000363456 119 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 RNU6-553P-201ENST00000364047 96 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 SUGT1P1-201ENST00000379514 476 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 SNORD116-9-201ENST00000384000 95 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 SNORD116-3-201ENST00000384287 95 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 SNORD116-7-201ENST00000384404 95 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 SNORD116-5-201ENST00000384462 95 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 RPL32P23-201ENST00000397237 405 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 RNU2-42P-201ENST00000410697 113 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 RNA5SP306-201ENST00000411087 107 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AC068533.2-201ENST00000411872 306 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 RPL36AP36-201ENST00000418616 301 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AC092832.1-201ENST00000422934 400 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AL354941.1-201ENST00000438600 464 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AL359073.1-201ENST00000448036 403 ntBASIC4.16□□□□□ -1.74
SNX9Q9Y5X1 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms