Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RN7SKP177-201ENST00000410567 355 ntBASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 RN7SKP142-201ENST00000411236 328 ntBASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 RAD23BP2-201ENST00000416003 1207 ntBASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 CCDC58P2-201ENST00000417131 366 ntBASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 OR1AA1P-201ENST00000419597 916 ntBASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 AL139099.1-201ENST00000497398 403 ntBASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 AC083829.1-201ENST00000503756 657 ntBASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 AC023141.12-201ENST00000512399 199 ntBASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 AC103783.1-201ENST00000520506 373 ntBASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 AP001981.2-201ENST00000603241 418 ntBASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 AC092354.2-201ENST00000607786 514 ntBASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 AC245008.1-201ENST00000608123 476 ntBASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 MIR378J-201ENST00000611988 109 ntBASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 AC025594.3-201ENST00000613068 790 ntBASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 AC005086.4-201ENST00000623065 213 ntBASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 CCT4P2-201ENST00000233836 1548 ntBASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL4A3BPQ9Y5P4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 FRG1BP-201ENST00000278882 761 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 AC021146.4-201ENST00000309229 279 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 RNU6-1181P-201ENST00000384191 106 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 RNU6-809P-201ENST00000384461 107 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 BEND7P1-201ENST00000422058 457 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 GDI2P2-201ENST00000445131 608 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 AL360221.1-201ENST00000445989 335 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 AC104308.1-201ENST00000454621 333 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 AC078918.1-201ENST00000498515 228 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 MTCO1P9-201ENST00000505577 1534 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 KCTD9P2-201ENST00000512203 1013 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 AF131216.2-201ENST00000512316 564 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 MTCYBP41-201ENST00000528913 1123 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 AP000873.5-201ENST00000533906 236 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 AL157700.1-201ENST00000561973 1432 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 AC034268.2-201ENST00000571784 482 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 AC073544.2-201ENST00000601155 540 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 RPL26P30-202ENST00000602923 645 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 AC012669.1-201ENST00000603209 283 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 AC027807.2-201ENST00000616099 408 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 OR56B2P-202ENST00000641377 2453 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 MAPK10-303ENST00000641324 3959 ntBASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
COL4A3BPQ9Y5P4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 AL390237.1-201ENST00000404226 1415 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 FGF7P2-201ENST00000332473 296 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 RN7SKP44-201ENST00000363602 316 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 SNORA7.2-201ENST00000364446 145 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 RNA5SP167-201ENST00000365461 116 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 RNU6-533P-201ENST00000384144 107 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 SDHCP2-201ENST00000398565 501 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 RNA5SP239-201ENST00000410218 129 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 RPS7P13-201ENST00000413955 498 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 MORF4L1P6-201ENST00000418771 268 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 UBTFL3-201ENST00000418934 1024 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 RPL21P112-201ENST00000434403 463 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms