Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.76□□□□□ -1.33
ZC3H4Q9UPT8 AC116447.1-201ENST00000613153 453 ntBASIC6.76□□□□□ -1.33
ZC3H4Q9UPT8 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.76□□□□□ -1.33
ZC3H4Q9UPT8 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.76□□□□□ -1.33
ZC3H4Q9UPT8 CYP3A51P-201ENST00000633513 256 ntBASIC6.76□□□□□ -1.33
ZC3H4Q9UPT8 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 MFSD8-216ENST00000641147 4009 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 Y_RNA.47-201ENST00000362697 108 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 Y_RNA.112-201ENST00000363250 102 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 RNU6-1188P-201ENST00000363795 107 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 RN7SKP113-201ENST00000363891 295 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 MIR130A-201ENST00000385274 89 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 AL078599.1-201ENST00000402075 293 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 MIR548F4-201ENST00000408515 105 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 MTATP6P16-201ENST00000434543 526 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 REG1CP-206ENST00000447469 496 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 AC104058.1-201ENST00000448028 297 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 RPL7P52-201ENST00000449200 742 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 MTCO3P10-201ENST00000455912 772 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 AC018797.3-201ENST00000513388 1241 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 AC011979.2-201ENST00000527568 352 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 AP005435.4-201ENST00000529514 284 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 AC024940.3-201ENST00000538551 316 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 AL118558.2-201ENST00000556294 238 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 OR4H6P-201ENST00000563771 921 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 AC109583.2-201ENST00000617367 129 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 AC244100.1-202ENST00000621554 382 ntBASIC6.75□□□□□ -1.33
ZC3H4Q9UPT8 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 AOX3P-204ENST00000491025 2107 ntBASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 AC011460.1-201ENST00000636268 1834 ntBASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 Y_RNA.234-201ENST00000364409 97 ntBASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 RNU6-1029P-201ENST00000384109 107 ntBASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 Y_RNA.476-201ENST00000384347 108 ntBASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 RNU6-1222P-201ENST00000384615 107 ntBASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 RPSAP35-201ENST00000413753 818 ntBASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 AC068533.1-201ENST00000418542 415 ntBASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 AL162739.1-201ENST00000450606 307 ntBASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 AC104308.1-201ENST00000454621 333 ntBASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 RPL23AP11-201ENST00000475260 469 ntBASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 AL035690.1-201ENST00000490892 383 ntBASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 AC093815.1-201ENST00000508637 280 ntBASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 AC017037.2-201ENST00000513850 890 ntBASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 MIR2117-201ENST00000516780 80 ntBASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 RNU6-566P-201ENST00000516790 107 ntBASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 AC136624.4-201ENST00000573044 370 ntBASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 AL355816.1-201ENST00000607951 118 ntBASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 uc_338.34-201ENST00000617467 174 ntBASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 AC091905.4-201ENST00000623432 202 ntBASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ZC3H4Q9UPT8 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 STX3-208ENST00000641815 3236 ntBASIC6.73□□□□□ -1.33
ZC3H4Q9UPT8 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms