Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.29□□□□□ -1.88
SCN11AQ9UI33 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCN11AQ9UI33 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.29□□□□□ -1.88
SCN11AQ9UI33 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.29□□□□□ -1.88
SCN11AQ9UI33 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.29□□□□□ -1.88
SCN11AQ9UI33 AP006248.2-201ENST00000623309 592 ntBASIC3.29□□□□□ -1.88
SCN11AQ9UI33 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SCN11AQ9UI33 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCN11AQ9UI33 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.28□□□□□ -1.88
SCN11AQ9UI33 RNU1-100P-201ENST00000365255 165 ntBASIC3.28□□□□□ -1.88
SCN11AQ9UI33 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SCN11AQ9UI33 MIR592-201ENST00000384959 97 ntBASIC3.28□□□□□ -1.88
SCN11AQ9UI33 SNORA3.2-201ENST00000408221 125 ntBASIC3.28□□□□□ -1.88
SCN11AQ9UI33 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.28□□□□□ -1.88
SCN11AQ9UI33 ST13P20-201ENST00000447996 1065 ntBASIC3.28□□□□□ -1.88
SCN11AQ9UI33 AC108210.2-201ENST00000503681 201 ntBASIC3.28□□□□□ -1.88
SCN11AQ9UI33 RNU6-1334P-201ENST00000516032 105 ntBASIC3.28□□□□□ -1.88
SCN11AQ9UI33 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.28□□□□□ -1.88
SCN11AQ9UI33 AC092608.2-201ENST00000624427 218 ntBASIC3.28□□□□□ -1.88
SCN11AQ9UI33 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SCN11AQ9UI33 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SCN11AQ9UI33 AC022031.1-201ENST00000585985 2593 ntBASIC3.28□□□□□ -1.89
SCN11AQ9UI33 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.28□□□□□ -1.89
SCN11AQ9UI33 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
SCN11AQ9UI33 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
SCN11AQ9UI33 OR51A3P-201ENST00000413596 924 ntBASIC3.28□□□□□ -1.89
SCN11AQ9UI33 ISCA1P6-201ENST00000427740 390 ntBASIC3.28□□□□□ -1.89
SCN11AQ9UI33 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
SCN11AQ9UI33 AP000857.1-201ENST00000532151 543 ntBASIC3.28□□□□□ -1.89
SCN11AQ9UI33 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.28□□□□□ -1.89
SCN11AQ9UI33 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.28□□□□□ -1.89
SCN11AQ9UI33 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.28□□□□□ -1.89
SCN11AQ9UI33 AC078899.3-201ENST00000599065 212 ntBASIC3.28□□□□□ -1.89
SCN11AQ9UI33 AC010620.2-201ENST00000600135 313 ntBASIC3.28□□□□□ -1.89
SCN11AQ9UI33 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.28□□□□□ -1.89
SCN11AQ9UI33 AC017076.1-201ENST00000607613 578 ntBASIC3.28□□□□□ -1.89
SCN11AQ9UI33 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.28□□□□□ -1.89
SCN11AQ9UI33 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SCN11AQ9UI33 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SCN11AQ9UI33 AC092079.1-201ENST00000558620 1985 ntBASIC3.27□□□□□ -1.89
SCN11AQ9UI33 SNORA36C-201ENST00000384289 132 ntBASIC3.27□□□□□ -1.89
SCN11AQ9UI33 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SCN11AQ9UI33 RNA5SP425-201ENST00000410336 112 ntBASIC3.27□□□□□ -1.89
SCN11AQ9UI33 AC069218.2-201ENST00000411665 344 ntBASIC3.27□□□□□ -1.89
SCN11AQ9UI33 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.27□□□□□ -1.89
SCN11AQ9UI33 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.27□□□□□ -1.89
SCN11AQ9UI33 AL591806.2-201ENST00000433122 173 ntBASIC3.27□□□□□ -1.89
SCN11AQ9UI33 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.27□□□□□ -1.89
SCN11AQ9UI33 MRPL50P4-201ENST00000446432 475 ntBASIC3.27□□□□□ -1.89
SCN11AQ9UI33 RPL21P71-201ENST00000465598 459 ntBASIC3.27□□□□□ -1.89
SCN11AQ9UI33 RPS4XP6-201ENST00000477670 797 ntBASIC3.27□□□□□ -1.89
SCN11AQ9UI33 SNORA70.14-201ENST00000516205 110 ntBASIC3.27□□□□□ -1.89
SCN11AQ9UI33 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.27□□□□□ -1.89
SCN11AQ9UI33 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.27□□□□□ -1.89
SCN11AQ9UI33 SNORA35B-201ENST00000607417 129 ntBASIC3.27□□□□□ -1.89
SCN11AQ9UI33 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SCN11AQ9UI33 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.26□□□□□ -1.89
SCN11AQ9UI33 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.26□□□□□ -1.89
SCN11AQ9UI33 EI24P2-201ENST00000397776 1076 ntBASIC3.26□□□□□ -1.89
SCN11AQ9UI33 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.26□□□□□ -1.89
SCN11AQ9UI33 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SCN11AQ9UI33 RN7SL636P-201ENST00000497504 294 ntBASIC3.26□□□□□ -1.89
SCN11AQ9UI33 AC147055.1-201ENST00000509261 750 ntBASIC3.26□□□□□ -1.89
SCN11AQ9UI33 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.26□□□□□ -1.89
SCN11AQ9UI33 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.26□□□□□ -1.89
SCN11AQ9UI33 AC012119.1-201ENST00000603184 222 ntBASIC3.26□□□□□ -1.89
SCN11AQ9UI33 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.26□□□□□ -1.89
SCN11AQ9UI33 MTCO1P9-201ENST00000505577 1534 ntBASIC3.26□□□□□ -1.89
SCN11AQ9UI33 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SCN11AQ9UI33 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SCN11AQ9UI33 AL590004.2-201ENST00000404787 371 ntBASIC3.25□□□□□ -1.89
SCN11AQ9UI33 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.25□□□□□ -1.89
SCN11AQ9UI33 AC126182.1-201ENST00000478134 357 ntBASIC3.25□□□□□ -1.89
SCN11AQ9UI33 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.25□□□□□ -1.89
SCN11AQ9UI33 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.25□□□□□ -1.89
SCN11AQ9UI33 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.25□□□□□ -1.89
SCN11AQ9UI33 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.25□□□□□ -1.89
SCN11AQ9UI33 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.25□□□□□ -1.89
SCN11AQ9UI33 AC093331.1-201ENST00000521474 169 ntBASIC3.25□□□□□ -1.89
SCN11AQ9UI33 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.25□□□□□ -1.89
SCN11AQ9UI33 AC128657.1-201ENST00000549459 145 ntBASIC3.25□□□□□ -1.89
SCN11AQ9UI33 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.25□□□□□ -1.89
SCN11AQ9UI33 AC092881.1-201ENST00000638218 2733 ntBASIC3.25□□□□□ -1.89
SCN11AQ9UI33 Z73965.1-201ENST00000623412 2297 ntBASIC3.25□□□□□ -1.89
SCN11AQ9UI33 MAPK10-322ENST00000641485 4530 ntBASIC3.25□□□□□ -1.89
SCN11AQ9UI33 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
SCN11AQ9UI33 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SCN11AQ9UI33 PNPT1P2-201ENST00000456768 2050 ntBASIC3.25□□□□□ -1.89
SCN11AQ9UI33 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.25□□□□□ -1.89
SCN11AQ9UI33 AL133412.1-201ENST00000380194 2992 ntBASIC3.25□□□□□ -1.89
SCN11AQ9UI33 AC066616.2-201ENST00000559334 1481 ntBASIC3.25□□□□□ -1.89
SCN11AQ9UI33 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.25□□□□□ -1.89
SCN11AQ9UI33 AL139415.2-201ENST00000431968 163 ntBASIC3.25□□□□□ -1.89
SCN11AQ9UI33 NDUFS5P3-201ENST00000450668 321 ntBASIC3.25□□□□□ -1.89
SCN11AQ9UI33 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.25□□□□□ -1.89
SCN11AQ9UI33 AC078785.3-201ENST00000476607 425 ntBASIC3.25□□□□□ -1.89
SCN11AQ9UI33 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.25□□□□□ -1.89
SCN11AQ9UI33 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.25□□□□□ -1.89
SCN11AQ9UI33 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.25□□□□□ -1.89
SCN11AQ9UI33 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms